Pre_GI Gene

Some Help

Host: NC_010102 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010102:1979742 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19797421980575834hypothetical proteinBLASTP
19806141981138525hypothetical proteinBLASTP
19812001981751552hypothetical proteinBLASTP
19817751982512738hypothetical proteinBLASTP
19825971983535939hypothetical proteinBLASTP
19835081983654147hypothetical protein
1983772198385685tRNA-SerQuickGO ontologyBLASTP
19839011984008108hypothetical protein
198401119851141104hypothetical proteinBLASTP
198512819864081281hypothetical proteinBLASTP
19866911987383693hypothetical proteinBLASTP
198742919885771149hypothetical proteinBLASTP
19888731988980108hypothetical proteinBLASTP
19890031989155153hypothetical protein
19891791989775597hypothetical proteinBLASTP
19897891989989201hypothetical proteinBLASTP
19899731990080108hypothetical proteinBLASTP
199011219916081497hypothetical proteinBLASTP
19916111991715105hypothetical proteinBLASTP
19918941992775882hypothetical proteinBLASTP
19928811993669789hypothetical proteinBLASTP
19939381994048111hypothetical proteinBLASTP
19942191994407189hypothetical protein
199456219960521491hypothetical proteinBLASTP
19961091996228120hypothetical proteinBLASTP
19963001996431132hypothetical proteinBLASTP
199649220004543963hypothetical proteinBLASTP
20005132000908396hypothetical proteinBLASTP
20009052001543639hypothetical proteinBLASTP
20015422001643102hypothetical protein
20016402001834195hypothetical proteinBLASTP