Pre_GI Gene

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Host: NC_007005 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007005:2149275 Pseudomonas syringae pv. syringae B728a, complete genome

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21492752150246972Mg2 transporter protein CorA-likeQuickGO ontologyBLASTP
21503702151059690enoyl-CoA hydrataseQuickGO ontologyBLASTP
21511852151478294hypothetical proteinBLASTP
21516312151960330EthDQuickGO ontologyBLASTP
21519622152381420hypothetical protein
21525312152701171hypothetical protein
21527662153134369Cytochrome c class IQuickGO ontologyBLASTP
21532012153731531hypothetical proteinBLASTP
21539932154496504auxin-binding protein putativeQuickGO ontologyBLASTP
21547122154969258hypothetical protein
21557942155952159hypothetical proteinBLASTP
215608321575701488Hemolysin-type calcium-binding regionQuickGO ontologyBLASTP
21589412159597657type III effector HopH1QuickGO ontologyBLASTP
21605842161180597type III effector HopAP1QuickGO ontologyBLASTP
21613992161701303hypothetical protein
2161907216199690tRNA-SerQuickGO ontologyBLASTP
21621752162924750short chain dehydrogenaseQuickGO ontologyBLASTP
21630382163604567Isochorismatase hydrolaseQuickGO ontologyBLASTP
216361821663622745SNF2-relatedHelicase C-terminalSWIM Zn-fingerQuickGO ontologyBLASTP
21664382166962525hypothetical protein
216697421704263453Transcription-repair coupling factorQuickGO ontologyBLASTP