Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:5121219 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
512121951227481530putative allantoin permeaseQuickGO ontologyBLASTP
51227615123489729putative racemaseQuickGO ontologyBLASTP
51235275124450924putative LysR family transcriptional regulatorQuickGO ontologyBLASTP
512457651253227473-ketoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
51253955126084690putative hydrolaseQuickGO ontologyBLASTP
51261835126557375hypothetical proteinBLASTP
51266125127190579hypothetical proteinBLASTP
51272745127642369hypothetical proteinBLASTP
512787851289181041putative cobalt-nickel-resistance system transmembrane proteinQuickGO ontologyBLASTP
51290295129964936putative glycine betaineL-proline-binding protein ABC transporter componentQuickGO ontologyBLASTP
51302255130836612hypothetical proteinBLASTP
513085851319851128putative gamma-butyrobetaine dioxygenaseQuickGO ontology
51320635132968906putative LysR family regulatory proteinQuickGO ontologyBLASTP
513325651347971542hypothetical proteinBLASTP
5134937513502387tRNA-SerQuickGO ontologyBLASTP
51353445136036693enoyl-CoA hydrataseQuickGO ontologyBLASTP
51362495136971723putative acyltransferaseQuickGO ontologyBLASTP
51371125138083972putative metal ion transport proteinQuickGO ontologyBLASTP
51380805138805726amidotransferaseQuickGO ontologyBLASTP
513889051410372148putative fatty acid oxidative multifunctional proteinQuickGO ontologyBLASTP
514105451422591206acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
51429075143713807putative cytochrome C-like proteinQuickGO ontologyBLASTP
51438775144680804hypothetical proteinBLASTP
51446775145627951hypothetical proteinBLASTP