Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:1186895 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
118689511908573963putative periplasmic proteinQuickGO ontologyBLASTP
11909181191049132hypothetical proteinBLASTP
119127911927871509SSS family major sodiumproline symporterQuickGO ontologyBLASTP
11936141194468855PhoB-dependent ATP-binding pho regulon componentQuickGO ontologyBLASTP
11945741195455882putative transcriptional regulatorQuickGO ontologyBLASTP
11975731198253681putative inner membrane proteinQuickGO ontologyBLASTP
119875911999191161putative inner membrane proteinQuickGO ontologyBLASTP
11999651200657693putative outer membrane proteinQuickGO ontologyBLASTP
120356912046751107putative dehydrogenase and related proteinsQuickGO ontologyBLASTP
1204828120491588tRNA-SerQuickGO ontologyBLASTP
12051511206089939paral putative oxidoreductaseQuickGO ontologyBLASTP
12061741206911738hypothetical proteinBLASTP
12069351207489555paral putative oxidoreductase componentQuickGO ontologyBLASTP
12075421208072531putative inner membrane proteinQuickGO ontologyBLASTP
12081101208943834putative transcriptional regulator in curly assemblytransport 2nd curli operonQuickGO ontologyBLASTP
12089701209386417curli production assemblytransport component 2nd curli operonQuickGO ontologyBLASTP
12094131209808396curli production assemblytransport component 2nd curli operonQuickGO ontologyBLASTP
12098131210463651putative transcriptional regulator LuxRUhpA familyQuickGO ontologyBLASTP
12112181211673456minor curlin subunit precursor nucleator for assembly of adhesive surface organellesQuickGO ontologyBLASTP
12117151212170456curlin major subunit coiled surface structures crypticQuickGO ontologyBLASTP
12122441212558315putative curli production proteinQuickGO ontologyBLASTP
12126891213009321putative periplasmic proteinQuickGO ontologyBLASTP
121344212150281587putative phospholipaseQuickGO ontologyBLASTP