Pre_GI: BLASTN Hits

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Query: NC_011283:785973 Klebsiella pneumoniae 342 chromosome, complete genome

Start: 785973, End: 811425, Length: 25453

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Klebsiella pneumoniae 342 was isolated from the stem tissue of Zea mays. This strain fixes atmospheric nitrogen and may be able to provide nitrogen, in the form of ammonia, to plant cells. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014121:4299500*4299500433477235273Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete03985BLASTN svgBLASTP svg
NC_013716:5201097*5201097527659975503Citrobacter rodentium ICC168, complete genome03800BLASTN svgBLASTP svg
NC_020260:440000*44000046819628197Cronobacter sakazakii Sp291, complete genome02823BLASTN svgBLASTP svg
NC_004631:3030580*3030580304986119282Salmonella enterica subsp. enterica serovar Typhi Ty2, complete02565BLASTN svgBLASTP svg
NC_003198:3042000*3042000306436622367Salmonella enterica subsp. enterica serovar Typhi str. CT18,02565BLASTN svgBLASTP svg
NC_020181:4800298*4800298483905538758Enterobacter aerogenes EA1509E, complete genome02514BLASTN svgBLASTP svg
NC_012912:3853377*3853377389607042694Dickeya zeae Ech1591, complete genome02052BLASTN svgBLASTP svg
NC_013592:713036*71303676182148786Dickeya dadantii Ech586, complete genome01907BLASTN svgBLASTP svg
NC_020064:3825916*3825916385292327008Serratia marcescens FGI94, complete genome01808BLASTN svgBLASTP svg
NC_011083:3171171*3171171319192520755Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,01534BLASTN svgBLASTP svg
NC_020181:13176471317647134038322737Enterobacter aerogenes EA1509E, complete genome01499BLASTN svgBLASTP svg
NC_004547:843475*84347586442120947Erwinia carotovora subsp. atroseptica SCRI1043, complete genome01243BLASTN svgBLASTP svg
AP010958:3474077*3474077351339539319Escherichia coli O103:H2 str. 12009 DNA, complete genome01197BLASTN svgBLASTP svg
NC_020211:2012480*2012480204710134622Serratia marcescens WW4, complete genome01090BLASTN svgBLASTP svg
NC_012779:3176820*3176820323178054961Edwardsiella ictaluri 93-146, complete genome0829BLASTN svgBLASTP svg
CP002797:4411763*4411763444042528663Escherichia coli NA114, complete genome0769BLASTN svgBLASTP svg
NC_010468:4252940*4252940428159928660Escherichia coli ATCC 8739, complete genome0747BLASTN svgBLASTP svg
NC_021066:17780001778000179688518886Raoultella ornithinolytica B6, complete genome0650BLASTN svgBLASTP svg
NC_004337:36219853621985364626824284Shigella flexneri 2a str. 301, complete genome1e-150541BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome1e-150541BLASTN svgBLASTP svg
NC_004741:41320564132056415578223727Shigella flexneri 2a str. 2457T, complete genome3e-148533BLASTN svgBLASTP svg
NC_008258:35815833581583360816926587Shigella flexneri 5 str. 8401, complete genome3e-148533BLASTN svgBLASTP svg
NC_010468:23100023100025334622347Escherichia coli ATCC 8739, complete genome6e-134486BLASTN svgBLASTP svg
NC_009800:3685651*3685651370909923449Escherichia coli HS, complete genome6e-134486BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome6e-134486BLASTN svgBLASTP svg
CU928160:37090813709081373009921019Escherichia coli IAI1 chromosome, complete genome6e-134486BLASTN svgBLASTP svg
AC_000091:39768883976888399503018143Escherichia coli W3110 DNA, complete genome1e-131478BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome1e-131478BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome1e-131478BLASTN svgBLASTP svg
NC_011748:39834323983432403268849257Escherichia coli 55989, complete genome9e-127462BLASTN svgBLASTP svg
CU928145:39834323983432403268849257Escherichia coli 55989 chromosome, complete genome9e-127462BLASTN svgBLASTP svg
NC_009801:39569173956917397533818422Escherichia coli E24377A, complete genome2e-124454BLASTN svgBLASTP svg
AP010958:43134624313462433479021329Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-124454BLASTN svgBLASTP svg
CP002516:24676724676726745320687Escherichia coli KO11, complete genome1e-119438BLASTN svgBLASTP svg
CP002185:38224703822470385930636837Escherichia coli W, complete genome1e-119438BLASTN svgBLASTP svg
NC_011751:17703761770376179379823423Escherichia coli UMN026 chromosome, complete genome2e-115424BLASTN svgBLASTP svg
NC_008570:3777469*3777469380230024832Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-105391BLASTN svgBLASTP svg
NC_010102:45570374557037457661219576Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-84321BLASTN svgBLASTP svg
NC_010498:38384193838419386683628418Escherichia coli SMS-3-5, complete genome2e-72281BLASTN svgBLASTP svg
NC_009648:18825001882500190677624277Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome3e-52214BLASTN svgBLASTP svg
AC_000091:29762932976293300863132339Escherichia coli W3110 DNA, complete genome2e-47198BLASTN svgBLASTP svg
CP002185:3167738*3167738320702439287Escherichia coli W, complete genome2e-47198BLASTN svgBLASTP svg
CP002516:903241*90324194330840068Escherichia coli KO11, complete genome2e-47198BLASTN svgBLASTP svg
CU928145:3196173*3196173323284736675Escherichia coli 55989 chromosome, complete genome2e-47198BLASTN svgBLASTP svg
CU928160:3030324*3030324306823137908Escherichia coli IAI1 chromosome, complete genome2e-47198BLASTN svgBLASTP svg
NC_000913:2975659*2975659300672831070Escherichia coli K12, complete genome2e-47198BLASTN svgBLASTP svg
NC_010468:906957*90695794803541079Escherichia coli ATCC 8739, complete genome2e-47198BLASTN svgBLASTP svg
NC_010473:3069529*3069529310059831070Escherichia coli str. K-12 substr. DH10B, complete genome2e-47198BLASTN svgBLASTP svg
NC_011748:3196173*3196173323284736675Escherichia coli 55989, complete genome2e-47198BLASTN svgBLASTP svg
NC_009801:31757143175714321109935386Escherichia coli E24377A, complete genome1e-45192BLASTN svgBLASTP svg
NC_002695:3702344*3702344374703744694Escherichia coli O157:H7 str. Sakai, complete genome5e-45190BLASTN svgBLASTP svg
NC_007384:3151344*3151344317840127058Shigella sonnei Ss046, complete genome3e-43184BLASTN svgBLASTP svg
NC_011751:3285646*3285646333126645621Escherichia coli UMN026 chromosome, complete genome1e-42182BLASTN svgBLASTP svg
NC_002655:3769643*3769643381434344701Escherichia coli O157:H7 EDL933, complete genome7e-41176BLASTN svgBLASTP svg
NC_011750:3407500*3407500343726129762Escherichia coli IAI39 chromosome, complete genome7e-38167BLASTN svgBLASTP svg
NC_009832:25963442596344262148625143Serratia proteamaculans 568, complete genome3e-34155BLASTN svgBLASTP svg
NC_011740:28599332859933288499725065Escherichia fergusonii ATCC 35469, complete genome4e-33151BLASTN svgBLASTP svg
NC_002947:21576482157648219238834741Pseudomonas putida KT2440, complete genome4e-33151BLASTN svgBLASTP svg
NC_012880:38273903827390385759930210Dickeya dadantii Ech703, complete genome2e-32149BLASTN svgBLASTP svg
NC_015566:43500804350080437739527316Serratia sp. AS12 chromosome, complete genome7e-32147BLASTN svgBLASTP svg
NC_011740:15953811595381161679021410Escherichia fergusonii ATCC 35469, complete genome1e-30143BLASTN svgBLASTP svg
NC_004129:24407442440744246509824355Pseudomonas fluorescens Pf-5, complete genome4e-30141BLASTN svgBLASTP svg
NC_020063:2785652*2785652280843522784Enterobacteriaceae bacterium strain FGI 57, complete genome2e-29139BLASTN svgBLASTP svg
NC_015633:2565753*2565753261159945847Vibrio anguillarum 775 chromosome chromosome I, complete sequence1e-27133BLASTN svgBLASTP svg
NC_005085:1096000*1096000111962323624Chromobacterium violaceum ATCC 12472, complete genome9e-25123BLASTN svgBLASTP svg
NC_010473:2839902*2839902288978149880Escherichia coli str. K-12 substr. DH10B, complete genome4e-24121BLASTN svgBLASTP svg
NC_000913:2746886*2746886280151454629Escherichia coli K12, complete genome4e-24121BLASTN svgBLASTP svg
AC_000091:2747520*2747520280214854629Escherichia coli W3110 DNA, complete genome4e-24121BLASTN svgBLASTP svg
NC_013592:27033272703327272585222526Dickeya dadantii Ech586, complete genome6e-23117BLASTN svgBLASTP svg
NC_008340:2034810*2034810206790533096Alkalilimnicola ehrlichei MLHE-1, complete genome1e-20109BLASTN svgBLASTP svg
NC_014153:436082*43608245651520434Thiomonas intermedia K12 chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NC_011901:3363500*3363500338699623497Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete9e-19103BLASTN svgBLASTP svg
NC_008825:25649652564965258966024696Methylibium petroleiphilum PM1, complete genome9e-19103BLASTN svgBLASTP svg
NC_008577:2818546*2818546284622227677Shewanella sp. ANA-3 chromosome 1, complete sequence9e-19103BLASTN svgBLASTP svg
NC_008343:88184*8818411285024667Granulibacter bethesdensis CGDNIH1, complete genome3e-18101BLASTN svgBLASTP svg
NC_015138:30224143022414304672924316Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-18101BLASTN svgBLASTP svg
NC_013520:718732*71873273509916368Veillonella parvula DSM 2008, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_019897:26965872696587272049823912Thermobacillus composti KWC4 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_012912:2800884*2800884281980818925Dickeya zeae Ech1591, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010067:1829041*1829041185794928909Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-1489.7BLASTN svgBLASTP svg
NC_020209:1847895*1847895187267824784Pseudomonas poae RE*1-1-14, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_007492:11936261193626121699723372Pseudomonas fluorescens PfO-1, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_009348:1064664*1064664109873434071Aeromonas salmonicida subsp. salmonicida A449, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014958:26143992614399263935424956Deinococcus maricopensis DSM 21211 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012559:23095662309566233407924514Laribacter hongkongensis HLHK9, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009138:46726846726851435347086Herminiimonas arsenicoxydans, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015422:3581848*3581848360595924112Alicycliphilus denitrificans K601 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014215:34991734991737916229246Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,5e-1177.8BLASTN svgBLASTP svg
NC_008782:2062962*2062962208700324042Acidovorax sp. JS42, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010002:45084674508467453496626500Delftia acidovorans SPH-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014831:149626*14962617221622591Thermaerobacter marianensis DSM 12885 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002937:19157871915787193430218516Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete3e-0971.9BLASTN svgBLASTP svg
NC_002516:77678777678780223925453Pseudomonas aeruginosa PAO1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006526:12020001202000121991217913Zymomonas mobilis subsp. mobilis ZM4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002940:1065246*1065246108809922854Haemophilus ducreyi 35000HP, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete5e-0867.9BLASTN svgBLASTP svg
NC_019673:359540*35954038271523176Saccharothrix espanaensis DSM 44229 complete genome2e-0765.9BLASTN svgBLASTP svg
NC_016025:59667059667062579729128Candidatus Chloracidobacterium thermophilum B chromosome chromosome2e-0765.9BLASTN svgBLASTP svg
NC_008044:1401814*1401814142133819525Silicibacter sp. TM1040, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008767:2160000*2160000218237122372Neisseria meningitidis FAM18, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015563:3979500*3979500400273623237Delftia sp. Cs1-4 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015957:19600019600021778021781Streptomyces violaceusniger Tu 4113 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_020302:2677617*2677617270009922483Corynebacterium halotolerans YIM 70093 = DSM 44683, complete8e-0763.9BLASTN svgBLASTP svg
NC_014659:4299552*4299552434331043759Rhodococcus equi 103S, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012526:4462*44622702622565Deinococcus deserti VCD115, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010688:1192410*1192410126259970190Xanthomonas campestris pv. campestris, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010644:1540249*1540249155929819050Elusimicrobium minutum Pei191, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007086:1224867*1224867128273457868Xanthomonas campestris pv. campestris str. 8004, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003902:3666544*3666544374180275259Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-0661.9BLASTN svgBLASTP svg