Pre_GI Gene

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Host: NC_007492 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007492:1193626 Pseudomonas fluorescens PfO-1, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
119362611950141389Possible Sensor with PASPAC domainQuickGO ontologyBLASTP
11951331195540408Response regulator receiver domain protein CheYQuickGO ontologyBLASTP
11957051195986282hypothetical protein
11961611197054894hypothetical proteinBLASTP
119706811982671200L-carnitine dehydratasebile acid-inducible protein FQuickGO ontologyBLASTP
11984141198956543YaeQQuickGO ontologyBLASTP
119901112007201710RecJ exonucleaseQuickGO ontologyBLASTP
120095212020581107NADHflavin oxidoreductaseNADH oxidaseQuickGO ontologyBLASTP
12021501202683534GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
120280512044331629Twin-arginine translocation pathway signalQuickGO ontologyBLASTP
12050331205236204hypothetical protein
12053361205848513hypothetical proteinBLASTP
120606612074091344ATPase-likeQuickGO ontologyBLASTP
12074121208038627hypothetical proteinBLASTP
120810012095841485Amino acid permease-associated regionQuickGO ontologyBLASTP
120973012111541425Betaine-aldehyde dehydrogenaseQuickGO ontologyBLASTP
12112051212014810Binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
12120041212939936Binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
121294112139781038Spermidineputrescine ABC transporter ATP-binding subunitQuickGO ontologyBLASTP
121427612154271152extracellular solute-binding protein family 1QuickGO ontologyBLASTP
121551012169971488Betaine-aldehyde dehydrogenaseQuickGO ontologyBLASTP