Pre_GI: BLASTN Hits

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Query: NC_010001:404066 Clostridium phytofermentans ISDg, complete genome

Start: 404066, End: 423599, Length: 19534

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012781:62976162976164846518705Eubacterium rectale ATCC 33656, complete genome3e-21111BLASTN svgBLASTP svg
NC_015978:412856*41285644063427779Lactobacillus sanfranciscensis TMW 1.1304 chromosome, complete3e-18101BLASTN svgBLASTP svg
NC_004557:26070732607073263038423312Clostridium tetani E88, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010995:2547164*2547164256843021267Cellvibrio japonicus Ueda107, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_020075:114790*11479013461719828Candidatus Blochmannia chromaiodes str. 640, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_005061:96536*9653614201245477Candidatus Blochmannia floridanus, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_014335:43275844327584434709919516Bacillus cereus biovar anthracis str. CI chromosome, complete4e-1487.7BLASTN svgBLASTP svg
NC_015581:771482*77148280463933158Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_012472:44004204400420441921018791Bacillus cereus 03BB102, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010184:44256764425676444871923044Bacillus weihenstephanensis KBAB4, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007530:44001524400152441849918348Bacillus anthracis str. 'Ames Ancestor', complete genome2e-1385.7BLASTN svgBLASTP svg
NC_006274:44482934448293446677918487Bacillus cereus E33L, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_005945:43997564399756441906119306Bacillus anthracis str. Sterne, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_003997:43990674399067441837219306Bacillus anthracis str. Ames, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007292:11339611339613533421939Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_010382:1020516*1020516103923818723Lysinibacillus sphaericus C3-41, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_004557:162670*16267018073018061Clostridium tetani E88, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008593:153014*15301417175318740Clostridium novyi NT, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_004344:25747125747127832220852Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,4e-1177.8BLASTN svgBLASTP svg
NC_008011:213386*21338624949536110Lawsonia intracellularis PHE/MN1-00, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010520:3674883*3674883369898424102Clostridium botulinum A3 str. Loch Maree, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014004:1*11849218492Candidatus Sulcia muelleri DMIN chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014909:86000*8600012150135502Candidatus Blochmannia vafer str. BVAF chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_015968:4117835*4117835416711149277Enterobacter asburiae LF7a chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_015687:3326461*3326461335126824808Clostridium acetobutylicum DSM 1731 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_003030:3324834*3324834334964224809Clostridium acetobutylicum ATCC 824, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_016023:1538000*1538000156098122982Bacillus coagulans 36D1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012778:2049694*2049694207227422581Eubacterium eligens ATCC 27750, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002528:404545*40454542822723683Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete1e-0765.9BLASTN svgBLASTP svg
NC_004545:392685*39268541484522161Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome1e-0765.9BLASTN svgBLASTP svg
NC_006448:5046*50463135826313Streptococcus thermophilus LMG 18311, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_006449:5046*50463138626341Streptococcus thermophilus CNRZ1066, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009654:1123709*1123709114240218694Marinomonas sp. MWYL1, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014328:303063*30306337786274800Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014393:4541000*4541000456644025441Clostridium cellulovorans 743B chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_006055:183823*18382321230928487Mesoplasma florum L1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008261:676000*67600070224526246Clostridium perfringens ATCC 13124, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015977:3215770*3215770327589560126Roseburia hominis A2-183 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_018664:2459994*2459994248609926106Clostridium acidurici 9a chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_019814:320260*32026034015019891Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas6e-0763.9BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_006274:5122500*5122500514359021091Bacillus cereus E33L, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007576:1564739*1564739158846023722Lactobacillus sakei subsp. sakei 23K, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011899:19260001926000194927823279Halothermothrix orenii H 168, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014328:4471995*4471995450215530161Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015958:2361551*2361551238227520725Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_016012:104500*10450012519420695Candidatus Arthromitus sp. SFB-rat-Yit, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_020291:117983*11798315068032698Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008525:1493317*1493317151610022784Pediococcus pentosaceus ATCC 25745, complete genome9e-0660BLASTN svgBLASTP svg
NC_007530:5033095*5033095507221139117Bacillus anthracis str. 'Ames Ancestor', complete genome9e-0660BLASTN svgBLASTP svg
NC_005957:5037499*5037499507811440616Bacillus thuringiensis serovar konkukian str. 97-27, complete9e-0660BLASTN svgBLASTP svg
NC_005945:5053000*5053000507465121652Bacillus anthracis str. Sterne, complete genome9e-0660BLASTN svgBLASTP svg
NC_004722:5194000*5194000525118457185Bacillus cereus ATCC 14579, complete genome9e-0660BLASTN svgBLASTP svg
NC_003997:5032969*5032969507209939131Bacillus anthracis str. Ames, complete genome9e-0660BLASTN svgBLASTP svg
NC_008600:5046000*5046000510070354704Bacillus thuringiensis str. Al Hakam, complete genome9e-0660BLASTN svgBLASTP svg
NC_008783:177161*17716121209934939Bartonella bacilliformis KC583, complete genome9e-0660BLASTN svgBLASTP svg
NC_010184:5085977*5085977510457318597Bacillus weihenstephanensis KBAB4, complete genome9e-0660BLASTN svgBLASTP svg
NC_010723:173280*17328022135248073Clostridium botulinum E3 str. Alaska E43, complete genome9e-0660BLASTN svgBLASTP svg
NC_011772:5158680*5158680520959950920Bacillus cereus G9842, complete genome9e-0660BLASTN svgBLASTP svg
NC_012472:5094009*5094009511312419116Bacillus cereus 03BB102, complete genome9e-0660BLASTN svgBLASTP svg
NC_014335:5005267*5005267502562020354Bacillus cereus biovar anthracis str. CI chromosome, complete9e-0660BLASTN svgBLASTP svg
NC_014909:662500*66250068970227203Candidatus Blochmannia vafer str. BVAF chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_020299:149118*14911816889819781Candidatus Kinetoplastibacterium oncopeltii TCC290E, complete9e-0660BLASTN svgBLASTP svg
NC_003909:4996783*4996783505271855936Bacillus cereus ATCC 10987, complete genome9e-0660BLASTN svgBLASTP svg