Pre_GI Gene

Some Help

Host: NC_009654 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009654:1123709 Marinomonas sp. MWYL1, complete genome

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11237091124596888periplasmic binding proteinQuickGO ontologyBLASTP
11245961125360765ABC transporter relatedQuickGO ontologyBLASTP
112568311272691587peptide chain release factor 3QuickGO ontologyBLASTP
11273391127686348iron-sulfur cluster assembly accessory proteinQuickGO ontologyBLASTP
112776111288341074integral membrane sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
11288311129565735two component transcriptional regulatorQuickGO ontologyBLASTP
112968011308341155RND family efflux transporter MFP subunitQuickGO ontologyBLASTP
113087111339783108hydrophobeamphiphile efflux-1 HAE1 family proteinQuickGO ontologyBLASTP
11340481134890843hypothetical protein
11349931135295303hypothetical proteinBLASTP
11354251136015591ribosomal RNA methyltransferase RrmJFtsJQuickGO ontologyBLASTP
113608511380641980ATP-dependent metalloprotease FtsHQuickGO ontologyBLASTP
11380991138932834dihydropteroate synthaseQuickGO ontologyBLASTP
113893211402781347phosphoglucosamine mutaseQuickGO ontologyBLASTP
11403681141117750Triose-phosphate isomeraseQuickGO ontologyBLASTP
11411211141474354preprotein translocase SecG subunitQuickGO ontology
11419411142402462hypothetical proteinBLASTP