Pre_GI: BLASTN Hits

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Query: NC_007492:3180480 Pseudomonas fluorescens PfO-1, complete genome

Start: 3180480, End: 3234740, Length: 54261

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007492:3462929*3462929350940646478Pseudomonas fluorescens PfO-1, complete genome02345BLASTN svgBLASTP svg
NC_009512:755658*75565878272327066Pseudomonas putida F1, complete genome01051BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome01043BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome3e-134488BLASTN svgBLASTP svg
NC_004578:1719849*1719849174221722369Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-111412BLASTN svgBLASTP svg
NC_007005:98488*9848813693138444Pseudomonas syringae pv. syringae B728a, complete genome9e-110406BLASTN svgBLASTP svg
NC_004578:4204235*4204235422545421220Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-109404BLASTN svgBLASTP svg
NC_004578:38498353849835387260722773Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-109404BLASTN svgBLASTP svg
NC_010501:4787963*4787963480728619324Pseudomonas putida W619, complete genome1e-81313BLASTN svgBLASTP svg
NC_007508:27569452756945277931722373Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome8e-64254BLASTN svgBLASTP svg
NC_010170:44630004463000451176948770Bordetella petrii, complete genome1e-44190BLASTN svgBLASTP svg
NC_004129:3965947*3965947398362717681Pseudomonas fluorescens Pf-5, complete genome3e-42182BLASTN svgBLASTP svg
NC_021150:32827023282702330085018149Azotobacter vinelandii CA6, complete genome1e-38170BLASTN svgBLASTP svg
NC_012560:32827043282704330085218149Azotobacter vinelandii DJ, complete genome1e-38170BLASTN svgBLASTP svg
NC_015379:35706583570658359449623839Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-36163BLASTN svgBLASTP svg
NC_004578:31934903193490323511841629Pseudomonas syringae pv. tomato str. DC3000, complete genome9e-36161BLASTN svgBLASTP svg
NC_007492:33328393332839335417921341Pseudomonas fluorescens PfO-1, complete genome1e-31147BLASTN svgBLASTP svg
NC_008752:415599*41559944209126493Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-25125BLASTN svgBLASTP svg
NC_010172:480000*48000053036650367Methylobacterium extorquens PA1, complete genome3e-23119BLASTN svgBLASTP svg
NC_012660:21433762143376220316659791Pseudomonas fluorescens SBW25 chromosome, complete genome1e-22117BLASTN svgBLASTP svg
NC_015138:30224143022414304672924316Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete8e-21111BLASTN svgBLASTP svg
NC_015458:32700932700936547138463Pusillimonas sp. T7-7 chromosome, complete genome1e-19107BLASTN svgBLASTP svg
NC_007948:4558000*4558000461212254123Polaromonas sp. JS666, complete genome1e-19107BLASTN svgBLASTP svg
NC_012808:28862822886282290930323022Methylobacterium extorquens AM1, complete genome5e-19105BLASTN svgBLASTP svg
NC_008314:47772247772252609948378Ralstonia eutropha H16 chromosome 2, complete sequence7e-18101BLASTN svgBLASTP svg
NC_012856:3615550*3615550364899933450Ralstonia pickettii 12D chromosome 1, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_011894:30900003090000310978319784Methylobacterium nodulans ORS 2060, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_007908:12521891252189127831426126Rhodoferax ferrireducens T118, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_004129:5723787*5723787575817934393Pseudomonas fluorescens Pf-5, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_007951:17112231711223173758426362Burkholderia xenovorans LB400 chromosome 1, complete sequence5e-1695.6BLASTN svgBLASTP svg
NC_010002:528529*52852955003421506Delftia acidovorans SPH-1, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_011988:1036618*1036618106496728350Agrobacterium vitis S4 chromosome 2, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_016002:24539192453919250029546377Pseudogulbenkiania sp. NH8B, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_014931:1642179*1642179167070028522Variovorax paradoxus EPS chromosome, complete genome7e-1591.7BLASTN svgBLASTP svg
NC_014910:465980*46598050776541786Alicycliphilus denitrificans BC chromosome, complete genome7e-1591.7BLASTN svgBLASTP svg
NC_012691:2614603*26146032727599112997Tolumonas auensis DSM 9187, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_009439:91853491853494240823875Pseudomonas mendocina ymp, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_008752:1523768*1523768154381320046Acidovorax avenae subsp. citrulli AAC00-1, complete genome7e-1281.8BLASTN svgBLASTP svg
NC_007973:18217531821753184776126009Ralstonia metallidurans CH34 chromosome 1, complete sequence3e-1179.8BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_010552:33598933598935658620598Burkholderia ambifaria MC40-6 chromosome 2, complete sequence3e-1179.8BLASTN svgBLASTP svg
NC_007498:35748435748438618028697Pelobacter carbinolicus DSM 2380, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_004547:3866439*3866439389314026702Erwinia carotovora subsp. atroseptica SCRI1043, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_012850:3454270*3454270347928825019Rhizobium leguminosarum bv. trifolii WSM1325, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_008380:4078670*4078670410263623967Rhizobium leguminosarum bv. viciae 3841, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_007298:2769525*2769525280350733983Dechloromonas aromatica RCB, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_007005:3414579*3414579344125226674Pseudomonas syringae pv. syringae B728a, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_012792:38567038567040991424245Variovorax paradoxus S110 chromosome 2, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_015183:2483653*2483653251000626354Agrobacterium sp. H13-3 chromosome, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_018691:1293449*1293449131822524777Alcanivorax dieselolei B5 chromosome, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_013859:9500*95003559926100Azospirillum sp. B510 plasmid pAB510e, complete sequence7e-0971.9BLASTN svgBLASTP svg
NC_013592:14650151465015148872023706Dickeya dadantii Ech586, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_015856:940625*94062598805147427Collimonas fungivorans Ter331 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_015856:764651*76465179679232142Collimonas fungivorans Ter331 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_015733:1680500*1680500170310522606Pseudomonas putida S16 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_004129:31230003123000314059917600Pseudomonas fluorescens Pf-5, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_008343:88184*8818411285024667Granulibacter bethesdensis CGDNIH1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_010170:47399254739925476955229628Bordetella petrii, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012880:1127997*1127997115596427968Dickeya dadantii Ech703, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_005773:57347335734733576109926367Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_007509:719547195411100139048Burkholderia sp. 383 chromosome 3, complete sequence4e-0765.9BLASTN svgBLASTP svg
NC_007645:38704663870466392303252567Hahella chejuensis KCTC 2396, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_008027:23972552397255242125624002Pseudomonas entomophila L48, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_009348:14759551475955153571059756Aeromonas salmonicida subsp. salmonicida A449, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_009348:28369692836969285986022892Aeromonas salmonicida subsp. salmonicida A449, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_009654:1123709*1123709114240218694Marinomonas sp. MWYL1, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_011666:15724871572487160176329277Methylocella silvestris BL2, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_015138:1582458*1582458160012917672Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-0765.9BLASTN svgBLASTP svg
NC_008570:3220539*3220539328055660018Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_012660:31799803179980320794927970Pseudomonas fluorescens SBW25 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015376:36313923631392365107419683Burkholderia gladioli BSR3 chromosome chromosome 2, complete2e-0663.9BLASTN svgBLASTP svg
NC_015566:1127595*1127595116557137977Serratia sp. AS12 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015567:1127780*1127780116575637977Serratia sp. AS9 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_003062:2506959*2506959252983722879Agrobacterium tumefaciens str. C58 chromosome circular, complete6e-0661.9BLASTN svgBLASTP svg
NC_015379:24829012482901250376220862Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,6e-0661.9BLASTN svgBLASTP svg
NC_010505:40095040095042537624427Methylobacterium radiotolerans JCM 2831, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_009138:31535763153576318147527900Herminiimonas arsenicoxydans, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_003304:2507000*2507000253013123132Agrobacterium tumefaciens str. C58 chromosome circular, complete6e-0661.9BLASTN svgBLASTP svg