Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:3179980 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
31799803180798819putative lipoproteinQuickGO ontologyBLASTP
318082631821481323hypothetical proteinBLASTP
318214531833471203hypothetical proteinBLASTP
31833583184203846hypothetical proteinBLASTP
318431831857121395hypothetical proteinBLASTP
318584331868591017putative AraC family regulatory proteinQuickGO ontologyBLASTP
318699931882461248hypothetical proteinBLASTP
31882483189228981putative ThiF proteinQuickGO ontologyBLASTP
318922131906541434putative transporter-like proteinQuickGO ontologyBLASTP
319069331919251233hypothetical protein
31920933193088996hypothetical proteinBLASTP
319375131951661416outer membrane component of multidrug efflux systemQuickGO ontologyBLASTP
319516331983423180putative cation efflux proteinQuickGO ontologyBLASTP
319835831995991242HlyD family secretion proteinQuickGO ontologyBLASTP
31998113200338528putative fatty acid hydrolaseQuickGO ontologyBLASTP
32004363201350915putative LysR family transcriptional regulatorQuickGO ontologyBLASTP
32014573202272816putative dioxygenaseQuickGO ontologyBLASTP
32023493203320972putative glycine betaineL-proline ABC transporter substrate-binding periplasmic proteinQuickGO ontologyBLASTP
32033303203839510putative two-component system response regulatorQuickGO ontologyBLASTP
320383632061512316putative aerobic respiration sensor-response protein histidine protein kinasephosphatase sensor for arcAQuickGO ontologyBLASTP
32061483206801654putative two-component system response regulatorQuickGO ontologyBLASTP
320679832079491152putative two-component system sensor kinaseQuickGO ontologyBLASTP