Pre_GI Gene

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Host: NC_007492 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007492:3332839 Pseudomonas fluorescens PfO-1, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
333283933339961158Secretion protein HlyDQuickGO ontologyBLASTP
333401233371103099Hydrophobeamphiphile efflux-1 HAE1QuickGO ontologyBLASTP
33371903337831642Protein of unknown function DUF1345QuickGO ontologyBLASTP
33381193338475357hypothetical protein
333855233407952244Outer membrane autotransporter barrelQuickGO ontologyBLASTP
334099833429951998hypothetical proteinBLASTP
33430883343897810hypothetical proteinBLASTP
334411533451401026regulatory protein LacIQuickGO ontologyBLASTP
33452053345987783Xylose isomerase-like TIM barrelQuickGO ontologyBLASTP
334598033470171038PfkBQuickGO ontologyBLASTP
334707633483741299General substrate transporterQuickGO ontologyBLASTP
33483963349364969D-isomer specific 2-hydroxyacid dehydrogenase NAD-bindingQuickGO ontologyBLASTP
334937133505581188Aminotransferase class I and IIQuickGO ontologyBLASTP
33506963351154459hypothetical protein
335119133528161626chemotaxis sensory transducerQuickGO ontologyBLASTP
335304033541791140Glycerate kinaseQuickGO ontologyBLASTP