Pre_GI: BLASTP Hits

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Query: NC_015709:1769806:1769806 Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, complete

Start: 1769806, End: 1770951, Length: 1146

Host Lineage: Zymomonas mobilis; Zymomonas; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Country: United Kingdom; Isolation: Sick cider; Temp: Mesophile. The natural habitat of this organism includes sugar-rich plant saps where the bacterium ferments sugar to ethanol. The high conversion of sugars to ethanol makes this organism useful in industrial production systems, particularly in production of bioethanol for fuel. A recombinant strain of this bacterium is utilized for the conversion of sugars, particularly xylose, which is not utilized by another common sugar-fermenting organism such as yeast, to ethanol. Since xylose is a common breakdown product of cellulose or a waste component of the agricultural industry, it is an attractive source for ethanol production. Zymomonas mobilis was chosen for this process as it is ethanol-tolerant (up to 120 grams of ethanol per litre) and productive (5-10% more ethanol than Saccharomyces). This bacterium ferments using the Enter-Doudoroff pathway, with the result that less carbon is used in cellular biomass production and more ends up as ethanol, another factor that favors this organism for ethanol production.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014006:850763:9037189037189047881071Sphingobium japonicum UT26S chromosome 1, complete genomeDNA replication and repair protein RecF2e-67256
NC_019907:46994:6656866568677011134Liberibacter crescens BT-1 chromosome, complete genomeDNA recombination and repair protein RecF1e-59230
NC_013854:3126385:3127580312758031287641185Azospirillum sp. B510, complete genomeDNA replication and repair protein5e-55215
NC_009952:3522370:3547348354734835484331086Dinoroseobacter shibae DFL 12, complete genomeDNA replication and repair protein RecF6e-55215
NC_020300:131782:1412031412031423451143Bartonella australis Aust/NH1, complete genomerecombination protein F4e-54212
NC_005956:152497:1616811616811628141134Bartonella henselae str. Houston-1, complete genomerecombination protein F8e-53207
NC_011757:5742290:4428442855851158Methylobacterium chloromethanicum CM4, complete genomeDNA replication and repair protein RecF4e-52205
NC_005955:139907:1491031491031502361134Bartonella quintana str. Toulouse, complete genomerecombination protein F1e-51203
NC_010172:5447189:3032303241861155Methylobacterium extorquens PA1, complete genomeDNA replication and repair protein RecF2e-51203
NC_010263:13826:3501135011360931083Rickettsia rickettsii str. Iowa, complete genomeDNA replication and repair protein7e-45181
NC_009882:13826:3501935019361011083Rickettsia rickettsii str. 'Sheila Smith', complete genomerecombination protein F7e-45181
NC_016908:13826:3502135021361031083Rickettsia rickettsii str. Colombia chromosome, complete genomerecombination protein F7e-45181
NC_016909:16465:3501335013360951083Rickettsia rickettsii str. Arizona chromosome, complete genomerecombination protein F7e-45181
NC_016911:13826:3501035010360921083Rickettsia rickettsii str. Hauke chromosome, complete genomerecombination protein F7e-45181
NC_016914:13826:3509835098361801083Rickettsia rickettsii str. Hino chromosome, complete genomerecombination protein F7e-45181
NC_016915:13927:3506235062361441083Rickettsia rickettsii str. Hlp#2 chromosome, complete genomerecombination protein F5e-45181
NC_012633:12000:3240632406334881083Rickettsia africae ESF-5, complete genomeDNA replication and repair protein RecF2e-44180
NC_017065:13188:3575135751368331083Rickettsia slovaca str. D-CWPP chromosome, complete genomerecombination protein F2e-44180
NC_016639:13188:3575435754368361083Rickettsia slovaca 13-B chromosome, complete genomeDNA replication and repair protein RecF2e-44180
NC_012985:465354:4962314962314973581128Candidatus Liberibacter asiaticus str. psy62, complete genomerecombination protein F4e-44179
NC_016930:11721:3330333303343851083Rickettsia philipii str. 364D chromosome, complete genomerecombination protein F3e-44179
NC_017043:735150:7544397544397555211083Rickettsia montanensis str. OSU 85-930 chromosome, complete genomerecombination protein F3e-44179
NC_016931:38350:5708057080581621083Rickettsia massiliae str. AZT80 chromosome, complete genomerecombination protein F5e-43175
NC_007797:1451804:1468308146830814694231116Anaplasma phagocytophilum HZ, complete genomeputative DNA replication and repair protein RecF3e-31135
NC_004842:1081271:1086868108686810879831116Anaplasma marginale str. St. Maries, complete genomerecombination protein F1e-29131
NC_014328:1:3117311742171101Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative DNA replication and repair protein RecF6e-23108
NC_018664:1:3163316342841122Clostridium acidurici 9a chromosome, complete genomeDNA replication and repair protein RecF5e-22105
NC_009706:1:3033303341271095Clostridium kluyveri DSM 555 chromosome, complete genomerecombination protein F4e-21102
NC_011837:1:3024302441271104Clostridium kluyveri NBRC 12016, complete genomerecombination protein F4e-21102
NC_009092:4585784:2684268437661083Shewanella loihica PV-4, complete genomeDNA replication and repair protein RecF2e-1996.7
NC_013895:66641:9426494264954121149Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeputative recombination protein F4e-1996.3
NC_020260:3931567:3931567393156739326401074Cronobacter sakazakii Sp291, complete genomerecombination protein F5e-1995.5
NC_004557:32094:4842548425495371113Clostridium tetani E88, complete genomerecombination protein F2e-1893.6
NC_012781:4065:2984298440721089Eubacterium rectale ATCC 33656, complete genomeDNA replication and repair protein RecF6e-1892
NC_003030:1:3447344745381092Clostridium acetobutylicum ATCC 824, complete genomerecombination protein F9e-1891.7
NC_015687:1:3447344745381092Clostridium acetobutylicum DSM 1731 chromosome, complete genomerecombination protein F9e-1891.7
NC_013165:3146000:2840284039701131Slackia heliotrinireducens DSM 20476, complete genomerecF protein2e-1790.9
NC_010001:1:3870387049521083Clostridium phytofermentans ISDg, complete genomeDNA replication and repair protein RecF3e-1790.1
NC_015275:1:3052305241341083Clostridium lentocellum DSM 5427 chromosome, complete genomeDNA replication and repair protein RecF2e-1790.1
NC_004337:3590323:3871536387153638726091074Shigella flexneri 2a str. 301, complete genomerecombination protein F3e-1789.7
NC_009922:1:3236323643331098Alkaliphilus oremlandii OhILAs, complete genomeDNA replication and repair protein RecF5e-1789
NC_013171:1:3184318442631080Anaerococcus prevotii DSM 20548, complete genomeDNA replication and repair protein RecF9e-1788.2
NC_014210:5752651:5627562767601134Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DNA replication and repair protein RecF9e-1788.2
NC_014315:3319865:95019501105891089Nitrosococcus watsoni C-113 chromosome, complete genomeDNA replication and repair protein RecF1e-1687.8
NC_009089:1:3029302941441116Clostridium difficile 630, complete genomeDNA replication and repair protein2e-1687.4
NC_012673:1679744:1696312169631216974301119Exiguobacterium sp. AT1b, complete genomeDNA replication and repair protein RecF1e-1687.4
NC_010718:1:3167316743271161Natranaerobius thermophilus JW/NM-WN-LF, complete genomeDNA replication and repair protein RecF2e-1687
NC_006177:3549467:2948294840751128Symbiobacterium thermophilum IAM 14863, complete genomeDNA repair and genetic recombination protein2e-1686.7
NC_015433:1998427:2013306201330620144001095Streptococcus suis ST3 chromosome, complete genomeDNA replication and repair protein RecF3e-1686.7
NC_007929:1805000:3309330944481140Lactobacillus salivarius subsp. salivarius UCC118, complete genomeDNA replication and repair protein4e-1685.9
NC_014098:3372000:3292329244041113Bacillus tusciae DSM 2912 chromosome, complete genomeDNA replication and repair protein RecF8e-1685.1
NC_012778:2997:2997299740881092Eubacterium eligens ATCC 27750, complete genomeDNA replication and repair protein RecF1e-1584.7
NC_014171:1:3300330044271128Bacillus thuringiensis BMB171 chromosome, complete genomerecombination protein F1e-1584.3
NC_002516:6255854:3169316942781110Pseudomonas aeruginosa PAO1, complete genomerecombination protein F4e-1582.4
NC_014152:1:3018301841241107Thermincola sp. JR, complete genomeDNA replication and repair protein RecF5e-1582.4
NC_014220:2398334:2716271638221107Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeDNA replication and repair protein RecF6e-1582
NC_017208:1:3300330044271128Bacillus thuringiensis serovar chinensis CT-43 chromosome, completerecombination protein F7e-1582
NC_014761:1981435:1996460199646019974941035Oceanithermus profundus DSM 14977 chromosome, complete genomeDNA replication and repair protein recf8e-1581.6
NC_004461:1:3822382249371116Staphylococcus epidermidis ATCC 12228, complete genomerecombination protein F1e-1481.3
NC_015565:2879603:2945294540481104Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeDNA replication and repair protein recF1e-1481.3
NC_008578:2431074:3097309742121116Acidothermus cellulolyticus 11B, complete genomeDNA replication and repair protein RecF1e-1481.3
NC_010611:3879190:3027302741091083Acinetobacter baumannii ACICU, complete genomeRecombinational DNA repair ATPase (RecF pathway)1e-1480.9
NC_020209:4768500:4771601477160147727041104Pseudomonas poae RE*1-1-14, complete genomerecombination protein F2e-1480.5
NC_020829:1:2679267937881110Pseudomonas denitrificans ATCC 13867, complete genomerecombination protein F3e-1479.7
NC_014654:1:3111311142321122Halanaerobium sp. 'sapolanicus' chromosome, complete genomeDNA replication and repair protein RecF8e-1478.6
NC_007350:1:4036403651511116Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,DNA repair and genetic recombination protein1e-1378.2
NC_014623:723089:7230897230897245341446Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDNA replication and repair protein RecF1e-1377.8
NC_018665:1:3495349546491155Exiguobacterium antarcticum B7 chromosome, complete genomeDNA replication and repair protein recF1e-1377.8
NC_014363:2035141:2043220204322020443081089Olsenella uli DSM 7084 chromosome, complete genomeDNA replication and repair protein RecF2e-1377
NC_009512:1:3062306241651104Pseudomonas putida F1, complete genomeDNA replication and repair protein RecF2e-1376.6
NC_002947:8394:1222212222133251104Pseudomonas putida KT2440, complete genomerecombination protein F3e-1376.3
NC_010501:1:3081308141841104Pseudomonas putida W619, complete genomeDNA replication and repair protein RecF4e-1376.3
NC_015572:1:2684268437571074Methylomonas methanica MC09 chromosome, complete genomeDNA replication and repair protein recF4e-1375.9
NC_010322:1:3844384449471104Pseudomonas putida GB-1 chromosome, complete genomerecombination protein F4e-1375.9
NC_007677:71532:7153271532727701239Salinibacter ruber DSM 13855, complete genomeDNA replication and repair protein RecF6e-1375.5
NC_014032:71724:7172471724729621239Salinibacter ruber M8 chromosome, complete genomeDNA replication and repair protein RecF6e-1375.5
NC_010814:4099:2996299641021107Geobacter lovleyi SZ, complete genomeDNA replication and repair protein RecF1e-1274.3
NC_007498:3655304:2856285639471092Pelobacter carbinolicus DSM 2380, complete genomeDNA replication and repair protein3e-1273.2
NC_014550:3839389:3442344246051164Arthrobacter arilaitensis Re117, complete genomeDNA replication and repair protein RecF4e-1272.8
NC_018750:3964784:3967638396763839687591122Streptomyces venezuelae ATCC 10712, complete genomeDNA recombination and repair protein RecF4e-1272.8
NC_015052:2383865:3391339146291239Bifidobacterium longum subsp. infantis 157F, complete genomerecombination protein RecF4e-1272.8
NC_014656:1634397:1637135163713516383731239Bifidobacterium longum subsp. longum BBMN68 chromosome, completerecf4e-1272.8
NC_017221:2268276:2268743226874322699811239Bifidobacterium longum subsp. longum KACC 91563 chromosome,recombination protein RecF4e-1272.8
NC_008711:4579997:4132413253311200Arthrobacter aurescens TC1, complete genomeputative DNA replication and repair protein RecF5e-1272.4
NC_010577:1:3044304441381095Xylella fastidiosa M23, complete genomeDNA replication and repair protein RecF7e-1272
NC_010577:2513241:3044304441381095Xylella fastidiosa M23, complete genomeDNA replication and repair protein RecF7e-1272
NC_004556:1:3153315342471095Xylella fastidiosa Temecula1, complete genomerecombination protein F7e-1272
NC_008576:4701930:2711271138591149Magnetococcus sp. MC-1, complete genomeDNA replication and repair protein RecF1e-1171.2
NC_014221:169996:1925671925671936251059Truepera radiovictrix DSM 17093 chromosome, complete genomeDNA replication and repair protein RecF1e-1170.9
NC_002488:1:3161316142551095Xylella fastidiosa 9a5c, complete genomerecombination protein F2e-1170.5
NC_002488:2657274:3161316142551095Xylella fastidiosa 9a5c, complete genomerecombination protein F2e-1170.5
NC_015953:3684065:3687060368706036881901131Streptomyces sp. SirexAA-E chromosome, complete genomeDNA replication and repair protein RecF3e-1169.7
NC_015501:1669521:1685231168523116863461116Porphyromonas asaccharolytica DSM 20707 chromosome, completeDNA replication and repair protein recF3e-1169.7
NC_013929:5135285:5135285513528551364091125Streptomyces scabiei 87.22 chromosome, complete genomeDNA replication protein6e-1168.9
NC_011661:1542335:1560523156052315616021080Dictyoglomus turgidum DSM 6724, complete genomeDNA replication and repair protein RecF7e-1168.6
NC_014392:2513529:5071507161321062Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeDNA replication and repair protein RecF2e-1067
NC_012560:5338707:2688268837851098Azotobacter vinelandii DJ, complete genomeDNA replication and repair protein ,RecF2e-1067
NC_012803:3691:3691369149051215Micrococcus luteus NCTC 2665, complete genomeDNA replication and repair protein RecF4e-1065.9
NC_008541:4679022:4061406152661206Arthrobacter sp. FB24 chromosome 1, complete sequenceDNA replication and repair protein RecF5e-1065.9
NC_006087:1:4160416053171158Leifsonia xyli subsp. xyli str. CTCB07, complete genomerecombination protein F5e-1065.9
NC_011886:4376261:4290429054981209Arthrobacter chlorophenolicus A6, complete genomeDNA replication and repair protein RecF7e-1065.5
NC_014836:2919508:2792279238231032Desulfurispirillum indicum S5 chromosome, complete genomeDNA replication and repair protein RecF3e-0963.5
NC_009446:174951:2169122169122179821071Dichelobacter nodosus VCS1703A, complete genomeDNA replication and repair protein RecF2e-0860.8
NC_014151:4106624:4593459357891197Cellulomonas flavigena DSM 20109 chromosome, complete genomeDNA replication and repair protein RecF3e-0860.1
NC_015145:4232283:4506450657171212Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeDNA replication and repair protein RecF3e-0860.1
NC_015312:1:4026402651681143Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeDNA replication and repair protein recF3e-0756.6
NC_007644:3229:3229322943411113Moorella thermoacetica ATCC 39073, complete genomeDNA replication and repair protein RecF3e-0756.6
NC_007333:1:4988498861211134Thermobifida fusca YX, complete genomerecombination protein F7e-0755.5
NC_007333:3626510:4988498861211134Thermobifida fusca YX, complete genomerecombination protein F7e-0755.5
NC_013510:1:5315531564541140Thermomonospora curvata DSM 43183, complete genomeDNA replication and repair protein RecF6e-0755.5
NC_008817:1538507:154529715452971546274978Prochlorococcus marinus str. MIT 9515, complete genomeputative DNA repair and genetic recombination protein RecF3e-0653.1
NC_016843:1:2701270138341134Treponema pallidum subsp. pertenue str. Gauthier chromosome,recombination protein F5e-0652.4
NC_016842:1:2701270138341134Treponema pallidum subsp. pertenue str. SamoaD chromosome, completerecombination protein F5e-0652.4
NC_015714:1:2702270238351134Treponema paraluiscuniculi Cuniculi A chromosome, complete genomerecombination protein F5e-0652.4
NC_017268:1:2761276138341074Treponema pallidum subsp. pallidum str. Chicago chromosome,DNA replication and repair protein RecF5e-0652.4
NC_013521:4240468:4478447857221245Sanguibacter keddieii DSM 10542, complete genomeDNA replication and repair protein RecF8e-0651.6