Pre_GI Gene

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Host: NC_015312 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015312:1 Pseudonocardia dioxanivorans CB1190 chromosome, complete genome

Host Lineage: Pseudonocardia dioxanivorans; Pseudonocardia; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Country: USA; Environment: Sludge, Fresh water; Isolation: Industrial sludge contaminated; Temp: Mesophile; Temp: 30C. Pseudonocardia members are abundant in diverse environments, and are known to degrade a variety of pollutants. These bacteria are also important in biocatalysis applications and in the production of antibiotics. Pseudonocardia dioxanivorans was first isolated from 1,4-dioxane containing sludge. This organism is able to grow using 1,4-dioxane, a toxic compound used as an industrial solvent, as the sole carbon source.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
12117881668Chromosomal replication initiator protein dnaAQuickGO ontologyBLASTP
277139011131DNA polymerase III subunit betaQuickGO ontologyBLASTP
402651681143DNA replication and repair protein recFQuickGO ontologyBLASTP
53115907597hypothetical proteinBLASTP
625782391983DNA gyrase subunit BQuickGO ontologyBLASTP
8283108022520DNA gyrase subunit AQuickGO ontologyBLASTP
10861119641104hypothetical proteinBLASTP
1217412293120hypothetical protein
123351241076tRNA-AlaQuickGO ontology
12492138141323integrase family proteinQuickGO ontologyBLASTP
1456214732171hypothetical protein
1497715759783hypothetical proteinBLASTP
1594716051105hypothetical protein
1604816314267hypothetical protein
1633517228894transposase IS4 family proteinQuickGO ontologyBLASTP
17717194621746Integrase catalytic regionQuickGO ontologyBLASTP
1945920271813IstB domain-containing protein ATP-binding proteinQuickGO ontologyBLASTP
20268215451278transposase mutator typeQuickGO ontologyBLASTP
2245822712255hypothetical protein
2289523455561isochorismatase hydrolaseQuickGO ontologyBLASTP
23458246511194hypothetical proteinBLASTP