Pre_GI Gene

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Host: NC_004556 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004556:1 Xylella fastidiosa Temecula1, complete genome

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1998 from a naturally infected Californian, USA grapevine. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14614651320chromosomal replication initiation proteinQuickGO ontologyBLASTP
174728471101DNA polymerase III subunit betaQuickGO ontologyBLASTP
315342471095recombination protein FQuickGO ontologyBLASTP
45014746246hypothetical proteinBLASTP
474371872445DNA gyrase subunit BQuickGO ontologyBLASTP
73888062675hypothetical proteinBLASTP
81278942816hypothetical proteinBLASTP
9046102391194hypothetical proteinBLASTP
1068311348666TonB proteinQuickGO ontologyBLASTP
1144412208765biopolymer transport ExbB proteinQuickGO ontologyBLASTP
1226512684420biopolymer transport ExbD1 proteinQuickGO ontologyBLASTP
1269113101411biopolymer transport ExbD2 proteinQuickGO ontologyBLASTP
13819162062388dipeptidyl-peptidaseQuickGO ontologyBLASTP
1626116803543hypothetical proteinBLASTP
1703317950918coproporphyrinogen III oxidaseQuickGO ontologyBLASTP