Pre_GI Gene

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Host: NC_017221 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017221:2268276 Bifidobacterium longum subsp. longum KACC 91563 chromosome,

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
22682762268746471hypothetical proteinBLASTP
226874322699811239recombination protein RecFQuickGO ontologyBLASTP
227000922711331125DNA polymerase III subunit betaQuickGO ontologyBLASTP
227186822733701503chromosomal replication initiator protein DnaAQuickGO ontologyBLASTP
2273689227382313550S ribosomal protein L34QuickGO ontologyBLASTP
22738562274215360ribonuclease PQuickGO ontologyBLASTP
227452622755331008preprotein translocase subunitQuickGO ontologyBLASTP
22756572276190534hypothetical proteinBLASTP
22763422277007666glucose-inhibited division proteinQuickGO ontologyBLASTP
22772582278229972chromosome partitioning protein ParAQuickGO ontologyBLASTP
227822922795901362chromosome partitioning protein ParBQuickGO ontologyBLASTP
227995522811391185transposaseQuickGO ontologyBLASTP
228137422823781005ABC transporter permeaseQuickGO ontologyBLASTP
22824372283366930ABC transporter permeaseQuickGO ontologyBLASTP
22834732283619147hypothetical protein
228439922855711173ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
228558022865931014regulatory protein LacIQuickGO ontologyBLASTP
228662522884451821oligo-16-glucosidaseQuickGO ontologyBLASTP