Pre_GI: BLASTN Hits

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Query: NC_017221:2268276 Bifidobacterium longum subsp. longum KACC 91563 chromosome,

Start: 2268276, End: 2288445, Length: 20170

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015052:2383865*2383865240599922135Bifidobacterium longum subsp. infantis 157F, complete genome022410BLASTN svgBLASTP svg
NC_010816:1660066*1660066168402823963Bifidobacterium longum DJO10A, complete genome022340BLASTN svgBLASTP svg
NC_015067:2371428*2371428239399922572Bifidobacterium longum subsp. longum JCM 1217, complete genome022150BLASTN svgBLASTP svg
NC_004307:1620500*1620500164011119612Bifidobacterium longum NCC2705, complete genome022150BLASTN svgBLASTP svg
NC_012815:1862373*1862373188610023728Bifidobacterium animalis subsp. lactis DSM 10140, complete genome3e-98367BLASTN svgBLASTP svg
NC_018720:2138180*2138180217949941320Bifidobacterium asteroides PRL2011 chromosome, complete genome4e-94353BLASTN svgBLASTP svg
NC_015067:2282000*2282000230417622177Bifidobacterium longum subsp. longum JCM 1217, complete genome4e-76293BLASTN svgBLASTP svg
NC_010816:17359371735937175456618630Bifidobacterium longum DJO10A, complete genome4e-76293BLASTN svgBLASTP svg
NC_010816:2326453*2326453235368827236Bifidobacterium longum DJO10A, complete genome3e-73283BLASTN svgBLASTP svg
NC_004307:1701071*1701071172571824648Bifidobacterium longum NCC2705, complete genome1e-60242BLASTN svgBLASTP svg
NC_004307:18158251815825184877532951Bifidobacterium longum NCC2705, complete genome5e-35157BLASTN svgBLASTP svg
NC_013721:1581370*1581370160165720288Gardnerella vaginalis 409-05, complete genome2e-34155BLASTN svgBLASTP svg
NC_015671:874500*87450089942324924Cellvibrio gilvus ATCC 13127 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013093:2895511*2895511291828622776Actinosynnema mirum DSM 43827, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_013595:10329633*103296331035599926367Streptosporangium roseum DSM 43021, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013093:21322842132284215260320320Actinosynnema mirum DSM 43827, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014963:50349045034904505612221219Terriglobus saanensis SP1PR4 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018750:3964784*3964784398396119178Streptomyces venezuelae ATCC 10712, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015953:3684065*3684065371159927535Streptomyces sp. SirexAA-E chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014830:4012999*4012999403999927001Intrasporangium calvum DSM 43043 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg