Pre_GI Gene

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Host: NC_002488 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002488:1 Xylella fastidiosa 9a5c, complete genome

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a pathogenic strain (8.1b) isolated in 1992 in France that had come from infected twigs derived from the sweet orange strain Valencia in Brazil in the same year. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. Xylella fastidiosa is similar to Xanthomonas campestris pv. campestris in that it produces a wide variety of pathogenic factors for colonization in a host-specific manner including a large number of fimbrial and afimbrial adhesins for attachment. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14314621320chromosomal replication initiation proteinQuickGO ontologyBLASTP
175928591101DNA polymerase III subunit betaQuickGO ontologyBLASTP
316142551095recombination protein FQuickGO ontologyBLASTP
45004766267hypothetical proteinBLASTP
476372072445DNA gyrase subunit BQuickGO ontologyBLASTP
80428962921hypothetical proteinBLASTP
9066102591194hypothetical proteinBLASTP
102991039496hypothetical protein
1070311368666TonB proteinQuickGO ontologyBLASTP
1146412228765biopolymer transport ExbB proteinQuickGO ontologyBLASTP
1228512707423biopolymer transport ExbD1 proteinQuickGO ontologyBLASTP
1271113121411biopolymer transport ExbD2 proteinQuickGO ontologyBLASTP
1319913354156hypothetical protein
1351313629117hypothetical protein
13839162262388dipeptidyl-peptidaseQuickGO ontologyBLASTP
1628116823543hypothetical proteinBLASTP
1704217959918coproporphyrinogen III oxidaseQuickGO ontologyBLASTP