Pre_GI Gene

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Host: NC_009512 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009512:1 Pseudomonas putida F1, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
38519021518chromosomal replication initiator protein DnaAQuickGO ontologyBLASTP
194330461104DNA polymerase III beta subunitQuickGO ontologyBLASTP
306241651104DNA replication and repair protein RecFQuickGO ontologyBLASTP
417065902421DNA gyrase B subunitQuickGO ontologyBLASTP
74278065639hypothetical proteinBLASTP
8046100041959Integrase catalytic regionQuickGO ontologyBLASTP
1000110960960AAA ATPaseQuickGO ontologyBLASTP
11036129521917hypothetical proteinBLASTP
1300913368360hypothetical proteinBLASTP
1374014072333hypothetical proteinBLASTP
1417014625456protein of unknown function DUF411QuickGO ontologyBLASTP
1461515394780hypothetical proteinBLASTP
15404165191116copper resistance B precursorQuickGO ontologyBLASTP
1650916850342hypothetical proteinBLASTP
16847188622016copper-resistance protein CopA familyQuickGO ontologyBLASTP