Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:4585784 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11114901380chromosomal replication initiator protein DnaAQuickGO ontologyBLASTP
151126111101DNA polymerase III beta subunitQuickGO ontologyBLASTP
268437661083DNA replication and repair protein RecFQuickGO ontologyBLASTP
378362002418DNA gyrase B subunitQuickGO ontologyBLASTP
63227041720hypothetical protein
70757803729LamBYcsF family proteinQuickGO ontologyBLASTP
77938725933urea amidolyase related proteinQuickGO ontologyBLASTP
87229408687Allophanate hydrolase subunit 1QuickGO ontologyBLASTP
9507115762070Glycine--tRNA ligaseQuickGO ontologyBLASTP
1158912494906Glycine--tRNA ligaseQuickGO ontologyBLASTP
1260413173570DNA-3-methyladenine glycosylase IQuickGO ontologyBLASTP
458578445876731890glucose inhibited division protein AQuickGO ontologyBLASTP
45881654588605441flavodoxinnitric oxide synthaseQuickGO ontologyBLASTP
45887364589518783ubiquinone biosynthesis O-methyltransferaseQuickGO ontologyBLASTP
45897304590698969Inosineuridine-preferring nucleoside hydrolaseQuickGO ontologyBLASTP
45907364591377642Lysine exporter protein LYSEYGGAQuickGO ontologyBLASTP
45915884592277690hypothetical proteinBLASTP
45939004594484585Resolvase N-terminal domainQuickGO ontologyBLASTP
45945634595552990AAA ATPase central domain proteinQuickGO ontologyBLASTP
459557345981162544hypothetical proteinBLASTP
459843445997951362tRNA modification GTPase TrmEQuickGO ontologyBLASTP
45999004601528162960 kDa inner membrane insertion proteinQuickGO ontologyBLASTP
46015324601786255protein of unknown function DUF37QuickGO ontologyBLASTP
46017534602115363ribonuclease P protein componentQuickGO ontologyBLASTP
46021254602262138ribosomal protein L34QuickGO ontologyBLASTP