Pre_GI: BLASTP Hits

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Query: NC_015703:2104058:2126370 Runella slithyformis DSM 19594 chromosome, complete genome

Start: 2126370, End: 2126564, Length: 195

Host Lineage: Runella slithyformis; Runella; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: Environment: Fresh water, Host; Isolation: Fresh water lake; USA, Louisiana, Baton; Temp: Psychrophile. This is a species of curved, nonflexible, pink bacteria. The species is of interest because it is able to grow at temperatures as low as 4°C. The species epithet is derived from slithy, a nonsense word from Lewis Carroll's Jabberwocky for a fictional organism that is 'slithy' and the Latin word 'suffix' meaning '-like, in the shape of', yielding the Neo-Latin word 'slithyformis' meaning 'slithy in form'.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015914:3317029:333467233346723334869198Cyclobacterium marinum DSM 745 chromosome, complete genomecold-shock DNA-binding domain-containing protein4e-1476.6
NC_013061:1:320032003391192Pedobacter heparinus DSM 2366, complete genomeCold-shock protein DNA-binding3e-1270.5
NC_015703:6295500:630274063027406302931192Runella slithyformis DSM 19594 chromosome, complete genomecold-shock DNA-binding domain-containing protein4e-1270.1
NC_013730:834500:834827834827835018192Spirosoma linguale DSM 74, complete genomecold-shock DNA-binding domain protein1e-1168.6
NC_017045:631761:649661649661649852192Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,colD-shock DNA-binding protein family8e-1165.9
NC_014738:469945:487845487845488036192Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,colD-shock DNA-binding protein family8e-1165.9
NC_020125:1237536:124051012405101240701192Riemerella anatipestifer RA-CH-2, complete genomeCold shock protein8e-1165.9
NC_013037:6209424:622373362237336223924192Dyadobacter fermentans DSM 18053, complete genomecold-shock DNA-binding domain protein5e-1063.2
NC_019974:1909244:193898319389831939177195Natronococcus occultus SP4, complete genomecold shock protein8e-0959.3
NC_015723:2116090:212798221279822128185204Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein6e-0959.3
NC_015850:510837:514716514716514919204Acidithiobacillus caldus SM-1 chromosome, complete genomecold-shock DNA-binding domain-containing protein8e-0958.9
NC_013061:2247191:224812622481262248332207Pedobacter heparinus DSM 2366, complete genomeCold-shock protein DNA-binding8e-0958.9
NC_014307:939601:952677952677952880204Ralstonia solanacearum CFBP2957 chromosome, complete genomecold shock-like protein cspd (csp-d)2e-0858.2
NC_014311:978761:100940210094021009605204Ralstonia solanacearum PSI07 chromosome, complete genomecold shock-like protein CspD2e-0858.2
NC_008800:3279468:328277832827783282987210Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,cold shock protein CspE2e-0857.8
NC_015224:1440283:145498914549891455198210Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,cold shock protein CspE2e-0857.8
NC_015416:2113949:211602521160252116219195Methanosaeta concilii GP-6 chromosome, complete genomecold shock DNA binding domain-containing protein3e-0857.4
NC_015671:3153325:317055931705593170762204Cellvibrio gilvus ATCC 13127 chromosome, complete genomecold-shock DNA-binding domain-containing protein3e-0857.4
NC_004088:1291754:131314113131411313395255Yersinia pestis KIM, complete genomecold shock protein E3e-0857.4
NC_003295:2669480:267541226754122675615204Ralstonia solanacearum GMI1000, complete genomePROBABLE COLD SHOCK-LIKE CSPD TRANSCRIPTION REGULATOR PROTEIN3e-0857.4
NC_008150:2785830:279363527936352793844210Yersinia pestis Antiqua, complete genomeputative cold shock protein4e-0857
NC_003143:2895617:291705429170542917263210Yersinia pestis CO92, complete genomecold shock protein E4e-0857
NC_016626:1669477:168986716898671690070204Burkholderia sp. YI23 plasmid byi_1p, complete sequencecold-shock protein4e-0857
NC_015381:2405446:241252224125222412725204Burkholderia gladioli BSR3 chromosome 1, complete sequenceCold-shock DNA-binding domain protein4e-0857
NC_007760:1415663:143145414314541431654201Anaeromyxobacter dehalogenans 2CP-C, complete genomecold-shock DNA-binding domain protein4e-0857
NC_011891:3004000:300406130040613004261201Anaeromyxobacter dehalogenans 2CP-1, complete genomecold-shock DNA-binding domain protein4e-0857
NC_007298:1499344:151842215184221518625204Dechloromonas aromatica RCB, complete genomeCold-shock protein, DNA-binding3e-0857
NC_014738:469945:488069488069488506438Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,colD-shock DNA-binding protein family5e-0856.6
NC_020125:1237536:124004012400401240477438Riemerella anatipestifer RA-CH-2, complete genomeCold shock protein5e-0856.6
NC_017045:631761:649885649885650322438Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,colD-shock DNA-binding protein family5e-0856.6
NC_007947:1229807:123674412367441236950207Methylobacillus flagellatus KT, complete genomecold-shock DNA-binding domain protein5e-0856.6
NC_021064:1705961:172466917246691724875207Propionibacterium avidum 44067, complete genomecold-shock DNA-binding protein family5e-0856.2
NC_020064:1150982:116604211660421166251210Serratia marcescens FGI94, complete genomecold shock protein6e-0856.2
NC_006396:2057209:208584320858432086037195Haloarcula marismortui ATCC 43049 chromosome I, complete sequencecold shock protein8e-0855.8
NC_014117:2608000:261571526157152615918204Burkholderia sp. CCGE1002 chromosome chromosome 1, completecold-shock DNA-binding domain protein8e-0855.8
NC_009659:2849000:284904028490402849243204Janthinobacterium sp. Marseille chromosome, complete genomecold-shock DNA-binding domain-containing protein9e-0855.5
NC_013730:4857090:487262648726264873072447Spirosoma linguale DSM 74, complete genomecold-shock DNA-binding domain protein9e-0855.5
NC_007164:2261644:228305322830532283256204Corynebacterium jeikeium K411, complete genomeputative cold shock protein1e-0755.1
NC_002927:2338549:238041423804142380620207Bordetella bronchiseptica RB50, complete genomecold shock-like protein1e-0755.1
NC_012880:2399205:240646524064652406674210Dickeya dadantii Ech703, complete genomecold-shock DNA-binding domain protein1e-0755.1
NC_012704:2296500:231761223176122317815204Corynebacterium kroppenstedtii DSM 44385, complete genomecold shock protein1e-0755.1
NC_010645:1523867:154496215449621545168207Bordetella avium 197N, complete genomecold shock-like protein2e-0754.7
NC_015222:523915:535412535412535615204Nitrosomonas sp. AL212 chromosome, complete genomecold-shock DNA-binding domain-containing protein2e-0754.7
NC_019962:2736815:274181927418192742013195Natrinema pellirubrum DSM 15624, complete genomecold shock protein2e-0754.7
NC_008752:3684739:368558536855853685797213Acidovorax avenae subsp. citrulli AAC00-1, complete genomecold-shock DNA-binding domain protein2e-0754.7
NC_014169:1740243:175247917524791752868390Bifidobacterium longum subsp. longum JDM301 chromosome, completeputative cold-shock DNA-binding domain-containing protein2e-0754.7
NC_014210:2277971:229152522915252291737213Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,cold-shock DNA-binding domain protein2e-0754.7
NC_008149:2652825:266034426603442660553210Yersinia pestis Nepal516, complete genomecold shock protein2e-0754.7
NC_020064:2779864:278063427806342780843210Serratia marcescens FGI94, complete genomecold shock protein2e-0754.7
NC_003143:1973867:198948919894891989698210Yersinia pestis CO92, complete genomecold shock protein2e-0754.7
NC_015061:3147691:315346531534653153674210Rahnella sp. Y9602 chromosome, complete genomecold-shock DNA-binding domain protein2e-0754.7
NC_008800:1942000:195654119565411956750210Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,cold shock-like protein CspC2e-0754.7
NC_016818:3148000:315400131540013154210210Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completecold shock protein2e-0754.7
NC_017047:3212000:321806732180673218276210Rahnella aquatilis HX2 chromosome, complete genomecold shock-like protein CspC2e-0754.7
NC_015731:169989:180983180983181186204Nitrosomonas sp. Is79A3 chromosome, complete genomecold-shock DNA-binding domain-containing protein2e-0754.7
NC_020126:6791726:679630767963076796516210Myxococcus stipitatus DSM 14675, complete genomeCold shock-like protein CspA3e-0754.3
NC_003116:988000:100827010082701008473204Neisseria meningitidis Z2491, complete genometranscriptional regulator3e-0754.3
NC_015312:2278566:228225022822502282456207Pseudonocardia dioxanivorans CB1190 chromosome, complete genomecold-shock DNA-binding domain-containing protein2e-0754.3
NC_008061:2368517:238130123813012381504204Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencecold-shock DNA-binding domain protein2e-0754.3
NC_014391:621062:628172628172628375204Micromonospora aurantiaca ATCC 27029 chromosome, complete genomecold-shock protein2e-0754.3
NC_010120:788000:807735807735807977243Neisseria meningitidis 053442, complete genometranscriptional regulator3e-0753.9
NC_007643:1781723:179248317924831792689207Rhodospirillum rubrum ATCC 11170, complete genomeCold-shock DNA-binding domain protein3e-0753.9
NC_017514:1396000:139604313960431396285243Neisseria meningitidis M01-240149 chromosome, complete genomeputative transcriptional regulator3e-0753.9
NC_017515:1429317:143094514309451431187243Neisseria meningitidis M04-240196 chromosome, complete genomeputative transcriptional regulator3e-0753.9
NC_017517:867595:887531887531887773243Neisseria meningitidis M01-240355 chromosome, complete genomeputative transcriptional regulator3e-0753.9
NC_010364:84900:856328563285826195Halobacterium salinarum R1, complete genomeputative cold shock protein3e-0753.9
NC_007759:2858240:286969928696992869899201Syntrophus aciditrophicus SB, complete genomecold shock protein3e-0753.9
NC_002607:81452:846178461784841225Halobacterium sp. NRC-1, complete genomeCspD13e-0753.9
NC_004545:499709:507389507389507598210Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomecold shock protein E3e-0753.9
NC_017512:760000:779059779059779262204Neisseria meningitidis WUE 2594, complete genomeputative cold shock protein3e-0753.9
NC_017505:841496:861553861553861756204Neisseria meningitidis alpha710 chromosome, complete genomecold-shock domain-containing protein3e-0753.9
NC_014752:1530000:153003315300331530236204Neisseria lactamica ST-640, complete genometranscriptional regulator3e-0753.9
NC_003112:844000:864530864530864733204Neisseria meningitidis MC58, complete genomecold-shock domain family protein3e-0753.9
NC_019962:3331849:333616033361603336354195Natrinema pellirubrum DSM 15624, complete genomecold shock protein3e-0753.9
NC_008543:2871747:288516928851692885681513Burkholderia cenocepacia HI2424 chromosome 2, complete sequencecold-shock DNA-binding domain protein3e-0753.9
NC_013174:309943:321837321837322040204Jonesia denitrificans DSM 20603, complete genomecold-shock DNA-binding domain protein4e-0753.5
NC_008513:343540:349218349218349427210Buchnera aphidicola str. Cc (Cinara cedri), complete genomeCspE4e-0753.5
NC_016947:70210:845028450284705204Mycobacterium intracellulare MOTT-02 chromosome, complete genomecold-shock DNA-binding protein family protein4e-0753.5
NC_013235:2257899:226599422659942266197204Nakamurella multipartita DSM 44233, complete genomecold-shock DNA-binding domain protein3e-0753.5
NC_009255:1890112:191566119156611915864204Burkholderia vietnamiensis G4 chromosome 2, complete sequencecold-shock DNA-binding protein family protein3e-0753.5
NC_014729:1908086:191271519127151912909195Halogeometricum borinquense DSM 11551 chromosome, complete genomecold-shock DNA-binding protein family3e-0753.5
NC_012559:854507:894039894039894242204Laribacter hongkongensis HLHK9, complete genomeCspA3e-0753.5
NC_010645:1523867:154368015436801543883204Bordetella avium 197N, complete genomecold shock-like protein5e-0753.1
NC_015856:1733500:175743717574371757640204Collimonas fungivorans Ter331 chromosome, complete genomecold-shock DNA-binding domain-containing protein5e-0753.1
NC_018080:1730534:173246917324691732678210Pseudomonas aeruginosa DK2 chromosome, complete genomecold acclimation protein B5e-0753.1
NC_008463:4389721:439103143910314391240210Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable cold-shock protein5e-0753.1
NC_002516:1236644:125777212577721257981210Pseudomonas aeruginosa PAO1, complete genomeprobable cold-shock protein5e-0753.1
NC_018080:4280401:428171142817114281920210Pseudomonas aeruginosa DK2 chromosome, complete genomecold-shock protein5e-0753.1
NC_014310:1750817:176244717624471762650204Ralstonia solanacearum PSI07 megaplasmid, complete sequencecold shock/stress protein, member of the csp-family4e-0753.1
NC_013209:1925341:192833819283381928541204Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator cold shock protein DNA-binding protein7e-0752.8
NC_012854:1:537053705573204Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132505,cold-shock DNA-binding domain protein7e-0752.8
NC_017108:1925323:192832019283201928523204Acetobacter pasteurianus IFO 3283-12, complete genometranscriptional regulator cold shock protein DNA-binding protein7e-0752.8
NC_017111:1925311:192830819283081928511204Acetobacter pasteurianus IFO 3283-32, complete genometranscriptional regulator cold shock protein DNA-binding protein7e-0752.8
NC_017121:1925323:192832019283201928523204Acetobacter pasteurianus IFO 3283-07, complete genometranscriptional regulator cold shock protein DNA-binding protein7e-0752.8
NC_017150:1833087:183608418360841836287204Acetobacter pasteurianus IFO 3283-01-42C, complete genometranscriptional regulator cold shock protein DNA-binding protein7e-0752.8
NC_016948:2931285:293417629341762934379204Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein7e-0752.8
NC_011989:2549252:256157025615702561773204Agrobacterium vitis S4 chromosome 1, complete sequencecold shock protein7e-0752.8
NC_014210:4377867:438242643824264382629204Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,cold-shock DNA-binding domain protein1e-0652.4
NC_011979:1683964:169583916958391696039201Geobacter sp. FRC-32, complete genomecold-shock DNA-binding domain protein9e-0752.4
NC_014758:10687:249502495025153204Calditerrivibrio nitroreducens DSM 19672 chromosome, completecold-shock DNA-binding domain protein8e-0752.4
NC_007974:1717828:172184317218431722223381Ralstonia metallidurans CH34 chromosome 2, complete sequencecold-shock DNA-binding domain protein8e-0752.4
NC_005966:1780468:179459717945971794809213Acinetobacter sp. ADP1, complete genomecold shock-like protein7e-0752.4
NC_012751:1190206:119321011932101193428219Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeRNA chaperone, transcription antiterminator, affects expression of rpoS and uspA1e-0652
NC_016111:3659269:368148636814863681689204Streptomyces cattleya NRRL 8057, complete genomecold-shock protein1e-0652
NC_021150:2906471:291560029156002915878279Azotobacter vinelandii CA6, complete genomecold shock protein, CspD1e-0652
NC_012560:2906459:291558829155882915866279Azotobacter vinelandii DJ, complete genomecold shock protein, CspD1e-0652
NC_006396:2057209:208564620856462085840195Haloarcula marismortui ATCC 43049 chromosome I, complete sequencecold shock protein1e-0652
NC_002927:5327094:533718253371825337388207Bordetella bronchiseptica RB50, complete genomeputative cold shock-like protein1e-0652
NC_014758:10687:245222452224725204Calditerrivibrio nitroreducens DSM 19672 chromosome, completecold-shock DNA-binding domain protein1e-0652
NC_005810:1976000:198003719800371980249213Yersinia pestis biovar Microtus str. 91001, complete genomecold shock protein2e-0651.6
NC_003143:1880000:188377318837731883985213Yersinia pestis CO92, complete genomecold shock protein2e-0651.6
NC_009381:2009842:202597220259722026184213Yersinia pestis Pestoides F chromosome, complete genomecold shock protein2e-0651.6
NC_017265:1715035:172019317201931720405213Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,cold shock protein2e-0651.6
NC_016026:296951:300675300675300881207Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeCold-shock' DNA-binding domain-containing protein2e-0651.6
NC_007498:919697:922602922602922802201Pelobacter carbinolicus DSM 2380, complete genomecold shock proteins2e-0651.6
NC_015954:2764919:279471927947192794913195Halophilic archaeon DL31 chromosome, complete genomecold-shock DNA-binding domain-containing protein1e-0651.6
NC_009483:1116385:113583111358311136037207Geobacter uraniireducens Rf4 chromosome, complete genomecold-shock DNA-binding domain-containing protein1e-0651.6
NC_006958:179690:186509186509186712204Corynebacterium glutamicum ATCC 13032, complete genomeCOLD-SHOCK PROTEIN CSPA1e-0651.6
NC_003450:179689:186508186508186711204Corynebacterium glutamicum ATCC 13032, complete genomecold shock protein1e-0651.6
NC_013739:5012394:502975750297575029960204Conexibacter woesei DSM 14684, complete genomecold-shock DNA-binding domain protein2e-0651.2
NC_006087:2292791:231260123126012312822222Leifsonia xyli subsp. xyli str. CTCB07, complete genomecold shock protein2e-0651.2
NC_014550:2013422:201503520150352015238204Arthrobacter arilaitensis Re117, complete genomecold shock protein3e-0650.8
NC_009439:3394174:339558033955803395789210Pseudomonas mendocina ymp, complete genomecold-shock DNA-binding protein family protein3e-0650.8
NC_010645:3720501:373078837307883730994207Bordetella avium 197N, complete genomecold shock protein2e-0650.8
NC_008601:753221:778319778319778522204Francisella tularensis subsp. novicida U112, complete genomecold shock protein, DNA-binding2e-0650.8
NC_010515:1375091:138632713863271386530204Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencecold-shock DNA-binding domain protein2e-0650.8
NC_015410:3701000:370139037013903701599210Pseudomonas mendocina NK-01 chromosome, complete genomecold-shock DNA-binding protein family protein2e-0650.8
NC_014640:6971000:698067169806716980877207Achromobacter xylosoxidans A8 chromosome, complete genomecold shock protein CspB3e-0650.4
NC_020418:2084937:209106620910662091278213Morganella morganii subsp. morganii KT, complete genomecold shock protein E4e-0650.4
NC_012029:45462:494944949449688195Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomecold-shock DNA-binding domain protein5e-0650.1
NC_015458:3077804:308761830876183087824207Pusillimonas sp. T7-7 chromosome, complete genomeputative cold shock-like protein5e-0650.1
NC_002927:2338549:237917323791732379418246Bordetella bronchiseptica RB50, complete genomecold shock-like protein4e-0650.1
NC_008009:5139896:516593151659315166131201Acidobacteria bacterium Ellin345, complete genomecold-shock DNA-binding protein4e-0650.1
NC_009380:3563421:358210835821083582311204Salinispora tropica CNB-440 chromosome, complete genomeDNA-binding cold-shock protein6e-0649.7
NC_009953:3852436:387191338719133872116204Salinispora arenicola CNS-205 chromosome, complete genomecold-shock DNA-binding domain-containing protein6e-0649.7
NC_019673:7598026:760523976052397605442204Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-0649.7
NC_008528:1265542:128662712866271286830204Oenococcus oeni PSU-1, complete genomeCold shock protein7e-0649.3
NC_010163:285710:303406303406303603198Acholeplasma laidlawii PG-8A chromosome, complete genomeDNA-binding cold shock protein7e-0649.3
NC_006512:728281:731105731105731320216Idiomarina loihiensis L2TR, complete genomeCold shock protein8e-0649.3
NC_012914:5225609:524452052445205244720201Paenibacillus sp. JDR-2, complete genomecold-shock DNA-binding domain protein8e-0649.3
NC_004603:1961432:197141119714111971623213Vibrio parahaemolyticus RIMD 2210633 chromosome I, completecold shock transcriptional regulator CspA9e-0648.9
NC_020453:4696000:471633747163374716546210Agromonas oligotrophica S58 DNA, complete genomecold-shock DNA-binding protein family protein1e-0548.9