Pre_GI: BLASTP Hits

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Query: NC_015662:110950:114225 Buchnera aphidicola (Cinara tujafilina) chromosome, complete

Start: 114225, End: 114509, Length: 285

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011283:4767269:478964447896444789907264Klebsiella pneumoniae 342 chromosome, complete genome30S ribosomal protein S208e-1682.4
NC_002695:12000:252202522025483264Escherichia coli O157:H7 str. Sakai, complete genome30S ribosomal protein S209e-1682
NC_010468:3970995:397714439771443977407264Escherichia coli ATCC 8739, complete genomeribosomal protein S209e-1682
NC_002655:12000:252212522125484264Escherichia coli O157:H7 EDL933, complete genome30S ribosomal protein S209e-1682
NC_011750:12047:290262902629289264Escherichia coli IAI39 chromosome, complete genome30S ribosomal protein S209e-1682
CP002516:4081484:408759640875964087859264Escherichia coli KO11, complete genomeribosomal protein S209e-1682
NC_011751:12000:251732517325436264Escherichia coli UMN026 chromosome, complete genome30S ribosomal protein S209e-1682
NC_007384:16500:279812798128244264Shigella sonnei Ss046, complete genome30S ribosomal subunit protein S209e-1682
NC_011748:11394:227762277623039264Escherichia coli 55989, complete genome30S ribosomal protein S209e-1682
CP002185:11921:240432404324306264Escherichia coli W, complete genome30S ribosomal subunit protein S209e-1682
CU928145:11394:227762277623039264Escherichia coli 55989 chromosome, complete genome30S ribosomal subunit protein S209e-1682
NC_009800:12162:241112411124374264Escherichia coli HS, complete genomeribosomal protein S209e-1682
CU928160:11381:227642276423027264Escherichia coli IAI1 chromosome, complete genome30S ribosomal subunit protein S209e-1682
NC_009801:11921:240302403024293264Escherichia coli E24377A, complete genomeribosomal protein S209e-1682
AP010958:12660:240422404224305264Escherichia coli O103:H2 str. 12009 DNA, complete genome30S ribosomal subunit protein S209e-1682
NC_016902:4081484:408759640875964087859264Escherichia coli KO11FL chromosome, complete genome30S ribosomal protein S209e-1682
NC_016822:15401:272012720127464264Shigella sonnei 53G, complete genome30S ribosomal protein S209e-1682
NC_013941:12000:252022520225465264Escherichia coli O55:H7 str. CB9615 chromosome, complete genome30S ribosomal protein S209e-1682
NC_013364:11382:227572275723020264Escherichia coli O111:H- str. 11128, complete genome30S ribosomal protein S209e-1682
NC_013361:11382:227732277323036264Escherichia coli O26:H11 str. 11368 chromosome, complete genome30S ribosomal protein S209e-1682
NC_013353:12660:240422404224305264Escherichia coli O103:H2 str. 12009, complete genome30S ribosomal protein S209e-1682
NC_013008:11938:252212522125484264Escherichia coli O157:H7 str. TW14359 chromosome, complete genome30S ribosomal protein S209e-1682
NC_012967:12161:248872488725150264Escherichia coli B str. REL606 chromosome, complete genome30S ribosomal protein S209e-1682
NC_012947:3753375:375857237585723758835264Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete30S ribosomal protein S209e-1682
NC_011741:11381:227642276423027264Escherichia coli IAI1 chromosome, complete genome30S ribosomal protein S209e-1682
NC_011415:11381:227622276223025264Escherichia coli SE11 chromosome, complete genome30S ribosomal protein S209e-1682
NC_011353:12000:252212522125484264Escherichia coli O157:H7 str. EC4115 chromosome, complete genome30S ribosomal protein S209e-1682
NC_008149:402599:422290422290422553264Yersinia pestis Nepal516, complete genome30S ribosomal protein S201e-1581.6
NC_008150:4561633:458132445813244581587264Yersinia pestis Antiqua, complete genome30S ribosomal protein S201e-1581.6
NC_006155:713174:730397730397730660264Yersinia pseudotuberculosis IP 32953, complete genome30S ribosomal protein S201e-1581.6
NC_003143:483395:503087503087503350264Yersinia pestis CO92, complete genome30S ribosomal protein S201e-1581.6
NC_002528:148274:160640160640160909270Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete30S ribosomal protein S203e-1477
NC_011833:147426:160658160658160927270Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,30S ribosomal protein S203e-1477
NC_011834:156197:160673160673160942270Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,30S ribosomal protein S203e-1477
NC_017252:155166:160667160667160936270Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,30S ribosomal protein S203e-1477
NC_017253:155170:160670160670160939270Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,30S ribosomal protein S203e-1477
NC_017254:156215:160689160689160958270Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,30S ribosomal protein S203e-1477
NC_017255:156195:160670160670160939270Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,30S ribosomal protein S203e-1477
NC_004347:3670145:369147636914763691742267Shewanella oneidensis MR-1, complete genomeribosomal protein S204e-1476.6
NC_008322:3585601:360713336071333607399267Shewanella sp. MR-7, complete genomeribosomal protein S205e-1476.3
NC_017256:144854:160729160729160998270Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,30S ribosomal protein S202e-1374.3
NC_010102:25893:466254662546810186Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-1373.6
NC_017259:148346:152287152287152550264Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,30S ribosomal protein S206e-1372.8
NC_009092:1263964:126396412639641264230267Shewanella loihica PV-4, complete genomeribosomal protein S208e-1372.4
NC_004061:146862:161309161309161578270Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome30S ribosomal protein S209e-1268.9
NC_019940:2931500:293642629364262936689264Thioflavicoccus mobilis 8321 chromosome, complete genome30S ribosomal protein S201e-1168.6
NC_015424:3890293:391210939121093912372264Aeromonas veronii B565 chromosome, complete genome30S ribosomal protein S202e-1167.4
NC_007484:3429140:343324634332463433509264Nitrosococcus oceani ATCC 19707, complete genomeRibosomal protein S20p4e-1166.6
NC_004545:141478:156975156975157235261Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome30S ribosomal protein S201e-1065.5
NC_014909:121771:136243136243136509267Candidatus Blochmannia vafer str. BVAF chromosome, complete genome30S ribosomal protein S201e-1065.5
NC_018080:5192264:521407152140715214346276Pseudomonas aeruginosa DK2 chromosome, complete genome30S ribosomal protein S201e-1065.1
NC_008463:5364428:538512753851275385402276Pseudomonas aeruginosa UCBPP-PA14, complete genomeribosomal protein S201e-1065.1
NC_014315:3278386:327952532795253279788264Nitrosococcus watsoni C-113 chromosome, complete genome30S ribosomal protein S203e-1063.5
NC_015633:2565753:256851125685112568840330Vibrio anguillarum 775 chromosome chromosome I, complete sequence30S ribosomal protein S20P4e-1063.5
NC_005061:96536:130753130753131019267Candidatus Blochmannia floridanus, complete genome30S ribosomal protein S203e-0960.5
NC_007645:6049340:607307060730706073339270Hahella chejuensis KCTC 2396, complete genomeribosomal protein S205e-0959.7
NC_010943:1332243:136779513677951368064270Stenotrophomonas maltophilia K279a, complete genomeputative 30S ribosomal protein S206e-0856.2
NC_015222:1749553:176301917630191763282264Nitrosomonas sp. AL212 chromosome, complete genome30S ribosomal protein S201e-0755.1
NC_014532:349384:365648365648365914267Halomonas elongata DSM 2581, complete genome30S ribosomal protein S202e-0754.7
NC_015731:867377:882209882209882472264Nitrosomonas sp. Is79A3 chromosome, complete genome30S ribosomal protein S202e-0754.3
NC_009952:3522370:354373935437393544005267Dinoroseobacter shibae DFL 12, complete genomeribosomal protein S206e-0752.8
NC_007298:3271071:327769532776953277964270Dechloromonas aromatica RCB, complete genome30S ribosomal protein S201e-0651.6
NC_009667:2860818:277277543267Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequence30S ribosomal protein S202e-0650.8