Pre_GI: BLASTP Hits

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Query: NC_015314:89815:101357 Pseudonocardia dioxanivorans CB1190 plasmid pPSED01, complete

Start: 101357, End: 102130, Length: 774

Host Lineage: Pseudonocardia dioxanivorans; Pseudonocardia; Pseudonocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Country: USA; Environment: Sludge, Fresh water; Isolation: Industrial sludge contaminated; Temp: 30C. Pseudonocardia members are abundant in diverse environments, and are known to degrade a variety of pollutants. These bacteria are also important in biocatalysis applications and in the production of antibiotics. Pseudonocardia dioxanivorans was first isolated from 1,4-dioxane containing sludge. This organism is able to grow using 1,4-dioxane, a toxic compound used as an industrial solvent, as the sole carbon source.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008699:2260606:228173422817342282474741Nocardioides sp. JS614, complete genomeGntR domain protein5e-37154
NC_015145:3236445:327180532718053272530726Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometranscriptional regulator2e-35149
NC_013530:423540:442371442371443075705Xylanimonas cellulosilytica DSM 15894, complete genomeGntR domain protein6e-29127
NC_015687:2632557:265543326554332656128696Clostridium acetobutylicum DSM 1731 chromosome, complete genomeFadR family transcriptional regulator4e-1581.6
NC_014479:2505823:252667125266712527399729Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeGntR family transcriptional regulator8e-1580.9
NC_016604:3137694:313854031385403139238699Mycobacterium rhodesiae NBB3 chromosome, complete genometranscriptional regulator1e-1480.5
NC_013526:105195:119507119507120259753Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeGntR domain protein5e-1478.2
NC_007644:1352794:135436113543611355110750Moorella thermoacetica ATCC 39073, complete genomeregulatory protein GntR, HTH2e-1376.3
NC_008027:775896:799660799660800427768Pseudomonas entomophila L48, complete genometranscriptional regulator, GntR family2e-1376.3
NC_015064:1355065:137103413710341371891858Acidobacterium sp. MP5ACTX9 chromosome, complete genomeGntR domain protein4e-1375.5
NC_008314:2744553:277746027774602778158699Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, GntR-family4e-1375.5
NC_008593:640000:651050651050651724675Clostridium novyi NT, complete genometranscriptional regulator, GntR family, putative4e-1375.5
NC_004193:2921103:292578529257852926489705Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator4e-1375.1
NC_006510:2044347:206127920612792062007729Geobacillus kaustophilus HTA426, complete genometranscriptional regulator7e-1374.3
NC_007974:2097334:213197321319732132776804Ralstonia metallidurans CH34 chromosome 2, complete sequenceregulatory protein GntR, HTH1e-1273.6
NC_013173:2261396:226881722688172269518702Desulfomicrobium baculatum DSM 4028, complete genomeGntR domain protein2e-1273.2
NC_007974:2097334:213104121310412131952912Ralstonia metallidurans CH34 chromosome 2, complete sequenceregulatory protein GntR, HTH2e-1272.8
NC_007953:811500:823033823033823689657Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, GntR family3e-1272.4
NC_008148:1859888:187784118778411878557717Rubrobacter xylanophilus DSM 9941, complete genomeGntR-like protein4e-1272
NC_013501:1337489:134428613442861345053768Rhodothermus marinus DSM 4252, complete genomeGntR domain protein7e-1271.2
NC_021171:2019755:202131920213192022035717Bacillus sp. 1NLA3E, complete genometranscriptional regulator1e-1170.5
NC_017095:119361:147716147716148471756Fervidobacterium pennivorans DSM 9078 chromosome, complete genometranscriptional regulator1e-1170.5
NC_015167:313506:317055317055317759705Cellulophaga lytica DSM 7489 chromosome, complete genomeGntR domain-containing protein2e-1169.3
NC_008268:4669530:469303346930334693788756Rhodococcus sp. RHA1, complete genometranscriptional regulator, GntR family4e-1168.6
NC_011751:3453683:349481534948153495549735Escherichia coli UMN026 chromosome, complete genometranscriptional regulator4e-1168.6
NC_011745:4862218:487607548760754876809735Escherichia coli ED1a chromosome, complete genomeTranscriptional regulator5e-1168.2
NC_007519:1244198:125890712589071259602696Desulfovibrio alaskensis G20 chromosome, complete genomeGntR family transcriptional regulator6e-1167.8
NC_004193:375416:394239394239394949711Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator1e-1067.4
NC_016612:178864:186603186603187319717Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGntR family transcriptional regulator2e-1066.6
NC_011898:1558208:156763615676361568325690Clostridium cellulolyticum H10, complete genomeGntR domain protein3e-1065.9
NC_008596:4196194:420135942013594202099741Mycobacterium smegmatis str. MC2 155, complete genomeGntR-family protein transcriptional regulator9e-1064.3
NC_014364:394899:435427435427436113687Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeGntR domain protein1e-0963.9
NC_015172:1471501:147493214749321475636705Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeregulatory protein GntR HTH1e-0963.5
NC_015594:332432:349319349319350053735Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeGntR domain-containing protein2e-0963.2
NC_015733:3923800:392690539269053927591687Pseudomonas putida S16 chromosome, complete genomeGntR family transcriptional regulator2e-0963.2
NC_011274:1544653:157101315710131571732720Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91GntR family regulatory protein2e-0963.2
NC_011094:1584038:158403815840381584709672Salmonella enterica subsp. enterica serovar Schwarzengrund strregulatory protein2e-0962.8
NC_016856:1621279:162656716265671627238672Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative regulatory protein2e-0962.8
NC_016860:1614280:161428016142801614951672Salmonella enterica subsp. enterica serovar Typhimurium strputative regulatory protein2e-0962.8
NC_003198:1463253:147775414777541478545792Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative regulatory protein2e-0962.8
NC_003197:1611302:161647016164701617261792Salmonella typhimurium LT2, complete genomeputative regulatory protein2e-0962.8
NC_016935:3819500:382680038268003827531732Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator3e-0962.4
NC_013740:1218429:123236812323681233063696Acidaminococcus fermentans DSM 20731, complete genomeGntR domain protein4e-0962
NC_015690:3269000:327636032763603277091732Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator5e-0961.6
NC_010337:2339056:234209423420942342804711Heliobacterium modesticaldum Ice1, complete genometranscriptional regulator, GntR family7e-0961.2
NC_014532:349384:349384349384350133750Halomonas elongata DSM 2581, complete genometranscriptional regulator, GntR family7e-0961.2
NC_007606:3755155:377484737748473775623777Shigella dysenteriae Sd197, complete genometranscriptional regulator6e-0961.2
NC_014323:4619344:464992446499244650634711Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein1e-0860.5
NC_014364:815346:820369820369821073705Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeGntR domain protein1e-0860.1
NC_003305:1743939:177186217718621772575714Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, GntR family1e-0860.1
NC_011992:1213726:122513512251351225830696Acidovorax ebreus TPSY, complete genomeGntR domain protein1e-0860.1
NC_007912:1231436:123868412386841239451768Saccharophagus degradans 2-40, complete genome1,4-alpha-glucan branching enzyme2e-0859.7
NC_007275:1:149981499815699702Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completetranscriptional regulator, GntR family2e-0859.7
NC_010676:2720068:273288227328822733655774Burkholderia phytofirmans PsJN chromosome 2, complete sequenceGntR domain protein2e-0859.7
NC_014306:2518996:252033425203342521041708Erwinia billingiae Eb661, complete genomeTranscriptional regulator, GntR family2e-0859.3
NC_012759:3648500:366540336654033666179777Escherichia coli BW2952 chromosome, complete genomeDNA-binding transcriptional repressor LldR2e-0859.3
NC_004337:3590323:375165237516523752428777Shigella flexneri 2a str. 301, complete genometranscriptional regulator2e-0859.3
NC_015726:3452232:345223234522323453200969Cupriavidus necator N-1 chromosome 1, complete sequenceGntR family transcriptional regulator3e-0858.9
NC_010694:891967:909868909868910632765Erwinia tasmaniensis, complete genomePyruvate dehydrogenase complex repressor3e-0858.9
NC_011832:913994:952978952978953670693Candidatus Methanosphaerula palustris E1-9c, complete genomeGntR domain protein5e-0858.5
NC_015761:1488807:149410414941041494778675Salmonella bongori NCTC 12419, complete genomeregulatory protein5e-0858.5
NC_011740:2737467:274186427418642742535672Escherichia fergusonii ATCC 35469, complete genomeputative gntR family regulatory protein8e-0857.8
NC_015376:3631392:363629736362973637145849Burkholderia gladioli BSR3 chromosome chromosome 2, completeGntR domain protein8e-0857.8
NC_016048:3667890:367938436793843680112729Oscillibacter valericigenes Sjm18-20, complete genomeputative GntR family transcriptional regulator1e-0757
NC_008786:3045770:3061342306134230624811140Verminephrobacter eiseniae EF01-2, complete genomeGntR domain protein1e-0757
NC_016935:4435759:444325444432544444000747Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein1e-0757
NC_013716:5020204:504139450413945042170777Citrobacter rodentium ICC168, complete genomeexu regulon transcriptional regulator1e-0756.6
NC_012214:897206:915170915170915934765Erwinia pyrifoliae Ep1/96, complete genomePyruvate dehydrogenase complex repressor2e-0756.2
NC_016783:429162:451014451014451754741Corynebacterium diphtheriae INCA 402 chromosome, complete genomeGntR family regulatory protein2e-0756.2
NC_017328:3088907:315387331538733154643771Shigella flexneri 2002017 chromosome, complete genomeTranscriptional activator for glc operon3e-0755.8
NC_007946:4875997:491812649181264918899774Escherichia coli UTI89, complete genomeUxuR uxu operon transcriptional regulator3e-0755.8
NC_007963:3553678:356013235601323560878747Chromohalobacter salexigens DSM 3043, complete genomeGntR-like protein4e-0755.5
NC_008253:4817864:485861648586164859389774Escherichia coli 536, complete genomeuxu operon transcriptional regulator4e-0755.5
NC_012880:1091486:111621711162171116951735Dickeya dadantii Ech703, complete genomeGntR domain protein4e-0755.5
NC_014834:614890:633477633477634205729Rhodopseudomonas palustris DX-1 chromosome, complete genomeGntR family transcriptional regulator3e-0755.5
NC_016947:1311264:133507813350781335860783Mycobacterium intracellulare MOTT-02 chromosome, complete genomeregulatory protein GntR5e-0755.1
NC_016582:11820671:118416551184165511842452798Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator6e-0754.7
NC_013971:817284:839648839648840412765Erwinia amylovora ATCC 49946 chromosome, complete genomepyruvate dehydrogenase complex repressor6e-0754.7
NC_007613:4403070:442852244285224429295774Shigella boydii Sb227, complete genomeregulator for uxu operon8e-0754.3
NC_011745:5114500:513677251367725137545774Escherichia coli ED1a chromosome, complete genomeDNA-binding transcriptional repressor UxuR8e-0754.3
NC_008595:2546696:257775925777592578541783Mycobacterium avium 104, complete genomeregulatory protein GntR, HTH8e-0754.3
NC_010125:1011430:101791310179131018671759Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator protein, GntR family1e-0653.9
NC_014323:245979:250336250336251085750Herbaspirillum seropedicae SmR1 chromosome, complete genomeGntR family transcription regulator protein1e-0653.9
NC_014532:2989185:299424429942442994999756Halomonas elongata DSM 2581, complete genomeGntR domain protein1e-0653.9
NC_010515:1205258:122268812226881223482795Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceGntR domain protein1e-0653.9
NC_016023:755237:755237755237755947711Bacillus coagulans 36D1 chromosome, complete genomeGntR domain-containing protein1e-0653.9
NC_011001:302500:311448311448312281834Burkholderia cenocepacia J2315 chromosome 2, complete sequenceepidemic strain marker regulator9e-0753.9
NC_010184:4425676:443665044366504437294645Bacillus weihenstephanensis KBAB4, complete genomeregulatory protein GntR HTH2e-0653.5
NC_016027:2512297:252258525225852523292708Gluconacetobacter xylinus NBRC 3288, complete genomeGntR family transcriptional regulator1e-0653.5
NC_010505:2690939:270182227018222702604783Methylobacterium radiotolerans JCM 2831, complete genomeGntR domain protein1e-0653.5
NC_011365:1865687:188920618892061889964759Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeGntR family transcriptional regulator1e-0653.5
NC_015856:268034:293167293167293937771Collimonas fungivorans Ter331 chromosome, complete genomeputative D-glucarate or D-galactorate regulator, GntR family2e-0653.1
NC_016612:361417:361417361417362190774Klebsiella oxytoca KCTC 1686 chromosome, complete genomeGntR family transcriptional regulator protein3e-0652.8
NC_009665:4675289:468162246816224682374753Shewanella baltica OS185 chromosome, complete genometranscriptional regulator PdhR2e-0652.8
NC_011663:4579777:458252545825254583277753Shewanella baltica OS223 chromosome, complete genometranscriptional regulator PdhR2e-0652.8
NC_008321:458811:474586474586475338753Shewanella sp. MR-4, complete genomeregulatory protein GntR, HTH4e-0652
NC_016948:3104403:311207231120723112752681Mycobacterium intracellulare MOTT-64 chromosome, complete genomeregulatory protein GntR4e-0652
NC_019673:7797666:780755578075557808226672Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, GntR family4e-0652
NC_015733:3595882:361682836168283617592765Pseudomonas putida S16 chromosome, complete genomeDNA-binding transcriptional regulator GlcC5e-0651.6
NC_002663:1988000:198801719880171988724708Pasteurella multocida subsp. multocida str. Pm70, complete genomeGntR5e-0651.6
NC_006274:4448293:445951244595124460156645Bacillus cereus E33L, complete genometranscriptional regulator, GntR family8e-0651.2
NC_012472:4400420:440866344086634409307645Bacillus cereus 03BB102, complete genometranscriptional regulator, GntR family8e-0651.2
NC_003997:4399067:441110544111054411749645Bacillus anthracis str. Ames, complete genometranscriptional regulator, GntR family8e-0651.2
NC_007530:4400152:441123244112324411876645Bacillus anthracis str. 'Ames Ancestor', complete genometranscriptional regulator, gntr family8e-0651.2
NC_004337:3590323:387759638775963878285690Shigella flexneri 2a str. 301, complete genomeregulator protein for dgo operon8e-0651.2
NC_021171:4549673:455230045523004552956657Bacillus sp. 1NLA3E, complete genomeGntR family transcriptional regulator8e-0651.2
NC_010498:1094000:111323411132341113923690Escherichia coli SMS-3-5, complete genomegalactonate operon transcriptional repressor8e-0651.2
NC_012590:637651:662143662143662859717Corynebacterium aurimucosum ATCC 700975, complete genometranscriptional regulator, ExuR family8e-0651.2
NC_014335:4327584:433961243396124340256645Bacillus cereus biovar anthracis str. CI chromosome, completeGntR family transcriptional regulator8e-0651.2
NC_005945:4399756:441179444117944412438645Bacillus anthracis str. Sterne, complete genometranscriptional regulator, GntR family8e-0651.2
NC_011658:4379274:438888943888894389533645Bacillus cereus AH187 chromosome, complete genomeGntR family transcriptional regulator8e-0651.2
NC_012850:3454270:345427034542703455028759Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeGntR domain protein6e-0651.2
NC_007712:433500:437760437760438524765Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator7e-0651.2
CP002185:4791811:481706548170654817790726Escherichia coli W, complete genomeDNA-binding transcriptional repressor7e-0651.2
NC_014171:4447856:445992144599214460565645Bacillus thuringiensis BMB171 chromosome, complete genomeGntR family transcriptional regulator7e-0651.2
NC_017200:4401945:441506644150664415710645Bacillus thuringiensis serovar finitimus YBT-020 chromosome,GntR family transcriptional regulator8e-0651.2
NC_016771:4333000:434267243426724343316645Bacillus cereus NC7401, complete genomeGntR family transcriptional regulator8e-0651.2
NC_012659:4399094:441113244111324411776645Bacillus anthracis str. A0248, complete genomeGntR family transcriptional regulator8e-0651.2
NC_011773:4461758:447283844728384473482645Bacillus cereus AH820 chromosome, complete genomeGntR family transcriptional regulator8e-0651.2
NC_016582:9664000:967760596776059678303699Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator8e-0650.8
NC_013172:953772:956773956773957486714Brachybacterium faecium DSM 4810, complete genometranscriptional regulator9e-0650.8