Pre_GI Gene

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Host: NC_013716 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013716:5020204 Citrobacter rodentium ICC168, complete genome

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5020204503029510092LifA-like proteinQuickGO ontologyBLASTP
50305345030713180BLASTP
503210050354803381putative T3SS effector protein EspN2-2QuickGO ontologyBLASTP
50373645037558195hypothetical protein
50378355038293459hypothetical proteinBLASTP
50384625038746285hypothetical proteinBLASTP
50387365039140405hypothetical proteinBLASTP
50391435039448306hypothetical proteinBLASTP
50394835039851369hypothetical proteinBLASTP
50400005040338339hypothetical proteinBLASTP
50403875041049663hypothetical proteinBLASTP
50413945042170777exu regulon transcriptional regulatorQuickGO ontologyBLASTP
504415550455671413uronate isomeraseQuickGO ontologyBLASTP
504558250470691488altronate hydrolaseQuickGO ontologyBLASTP
50472345047791558hypothetical proteinBLASTP
504780850490521245putative transport proteinQuickGO ontologyBLASTP