Pre_GI: BLASTP Hits

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Query: NC_014006:2932959:2951831 Sphingobium japonicum UT26S chromosome 1, complete genome

Start: 2951831, End: 2953093, Length: 1263

Host Lineage: Sphingobium japonicum; Sphingobium; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Sphingobium japonicum (strain NBRC 101211 / UT26S) is a yellow-pigmented, non-motile, aerobic, hexachlorocyclohexane (HCH)-degrading Gram-negative bacterium isolated from a dumpsite in the vicinity of an industry that has been producing lindane. HCH has been used extensively as insect control agents in the health and agriculture fields. Sphingobium japonicum, formerly Sphingomonas paucimobilis, is able to degrade hexachlorocyclohexane which has been used extensively as insect control agents in the health and agriculture fields.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015593:2914384:2917552291755229188531302Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeconjugation TrbI family protein3e-80299
NC_011666:1601983:1601983160198316031911209Methylocella silvestris BL2, complete genomeconjugation TrbI family protein6e-65248
NC_007925:3911323:3925335392533539265701236Rhodopseudomonas palustris BisB18, complete genomeconjugation TrbI-like protein1e-61237
NC_010725:3315007:3319252331925233205171266Methylobacterium populi BJ001, complete genomeconjugation TrbI family protein5e-61235
NC_009668:529175:5418135418135429401128Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceconjugation TrbI family protein5e-58225
NC_009720:750612:7800217800217811721152Xanthobacter autotrophicus Py2, complete genomeconjugation TrbI family protein5e-57222
NC_010338:4148667:4155362415536241565971236Caulobacter sp. K31, complete genomeconjugation TrbI family protein4e-57222
NC_014414:2569494:2569494256949425707501257Parvularcula bermudensis HTCC2503 chromosome, complete genomeconjugal transfer protein trbI3e-57222
NC_015186:491930:4949124949124961711260Acidiphilium multivorum AIU301, complete genomeconjugal transfer protein TrbI6e-57221
NC_014834:3472000:3498618349861834998261209Rhodopseudomonas palustris DX-1 chromosome, complete genomeconjugation TrbI family protein1e-56220
NC_009720:3317642:3333207333320733344631257Xanthobacter autotrophicus Py2, complete genomeconjugation TrbI family protein1e-56220
NC_017249:2109843:2116976211697621181871212Bradyrhizobium japonicum USDA 6, complete genomeconjugal transfer protein5e-56218
NC_015186:2839668:2855282285528228565591278Acidiphilium multivorum AIU301, complete genomeconjugal transfer protein TrbI6e-56218
NC_009485:8138314:8141321814132181425201200Bradyrhizobium sp. BTAi1 chromosome, complete genomeconjugal transfer protein TrbI4e-55215
NC_009720:670853:6772356772356784821248Xanthobacter autotrophicus Py2, complete genomeconjugation TrbI family protein1e-54214
NC_014834:959986:9842109842109853851176Rhodopseudomonas palustris DX-1 chromosome, complete genomeconjugation TrbI family protein1e-54214
NC_004463:1772541:1776632177663217778341203Bradyrhizobium japonicum USDA 110, complete genomeconjugal transfer protein2e-54213
NC_014834:614890:6214596214596226701212Rhodopseudomonas palustris DX-1 chromosome, complete genomeconjugation TrbI family protein2e-54213
NC_008254:534590:5542065542065554051200Mesorhizobium sp. BNC1, complete genomeconjugation TrbI-like protein2e-54213
NC_009720:3210387:3212089321208932132941206Xanthobacter autotrophicus Py2, complete genomeconjugation TrbI family protein3e-54213
NC_009720:813157:8273798273798285841206Xanthobacter autotrophicus Py2, complete genomeconjugation TrbI family protein1e-53210
NC_009720:4406991:4419880441988044211241245Xanthobacter autotrophicus Py2, complete genomeconjugation TrbI family protein2e-53209
NC_010170:4800000:4887431488743148886841254Bordetella petrii, complete genomeconjugal transfer protein TrbI3e-53209
NC_010125:1011430:1025592102559210267521161Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugation TrbI-like protein1e-52207
NC_015422:1643000:1657600165760016588861287Alicycliphilus denitrificans K601 chromosome, complete genomeconjugation TrbI family protein4e-52205
NC_015410:3209954:3213749321374932150141266Pseudomonas mendocina NK-01 chromosome, complete genomeconjugation TrbI family protein7e-52204
NC_010002:2933909:2959059295905929603271269Delftia acidovorans SPH-1, complete genomeconjugation TrbI family protein4e-51202
NC_009656:3817261:3832621383262138338981278Pseudomonas aeruginosa PA7 chromosome, complete genomeconjugation TrbI family protein1e-50201
NC_008577:1489643:1501877150187715031571281Shewanella sp. ANA-3 chromosome 1, complete sequenceconjugation TrbI family protein1e-50200
NC_014500:894136:9000959000959013391245Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbI1e-50200
NC_008757:77023:8012680126814451320Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeconjugation TrbI family protein3e-50199
NC_012912:1295653:1317386131738613186241239Dickeya zeae Ech1591, complete genomeconjugation TrbI family protein4e-50199
NC_015381:2859000:2871875287187528731911317Burkholderia gladioli BSR3 chromosome 1, complete sequenceconjugation TrbI family protein5e-50198
NC_011992:1381843:1384940138494013862231284Acidovorax ebreus TPSY, complete genomeconjugation TrbI family protein5e-50198
NC_013209:2582878:2587892258789225890611170Acetobacter pasteurianus IFO 3283-01, complete genomeconjugal transfer protein TrbI7e-47188
NC_010125:2813653:2829722282972228308941173Gluconacetobacter diazotrophicus PAl 5, complete genomeputative conjugation TrbI-like protein5e-43175
NC_002678:5714000:571716757171675717682516Mesorhizobium loti MAFF303099, complete genomesimilar to CONJUGAL TRANSFER PROTEIN TRBI2e-39163
NC_013422:1755875:1793675179367517949941320Halothiobacillus neapolitanus c2, complete genomeconjugation TrbI family protein2e-38160
NC_014500:1862000:188295018829501883471522Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbI6e-38158
NC_006371:1743982:1756319175631917574551137Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein TrbI3e-35149
NC_008781:2611702:2647158264715826486301473Polaromonas naphthalenivorans CJ2, complete genomeconjugation TrbI family protein1e-29130
NC_015385:1875671:1894075189407518954721398Treponema succinifaciens DSM 2489 chromosome, complete genomeconjugation TrbI family protein2e-24114
NC_015850:110364:1668211668211681371317Acidithiobacillus caldus SM-1 chromosome, complete genomeconjugation TrbI family protein4e-24112
NC_015386:107000:1161811161811176171437Treponema succinifaciens DSM 2489 plasmid pTRESU01, completeconjugation TrbI family protein3e-23109
NC_007950:206474:2077542077542090221269Polaromonas sp. JS666 plasmid 2, complete sequenceconjugation TrbI-like protein1e-21104
NC_016814:18000:3574535745369561212Sinorhizobium fredii HH103 plasmid pSfHH103c complete sequenceType IV secretion system protein virB103e-21103
NC_015593:1587684:1598790159879015998811092Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeconjugation TrbI family protein1e-20101
NC_008786:4070753:4086645408664540879221278Verminephrobacter eiseniae EF01-2, complete genomeconjugation TrbI family protein2e-1997.1
NC_016616:2699350:2740060274006027413851326Dechlorosoma suillum PS chromosome, complete genometype IV secretory pathway, VirB10 component5e-1789
NC_015850:2048251:2087030208703020884121383Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein1e-1687.8
NC_005090:1033746:1050597105059710517001104Wolinella succinogenes DSM 1740, complete genomeCOMB39e-1685.1
NC_017371:1470582:1512192151219215134001209Helicobacter pylori Gambia94/24 chromosome, complete genomeVirB10 type IV secretion protein1e-1584.7
NC_007798:652317:6615286615286629011374Neorickettsia sennetsu str. Miyayama, complete genometype IV secretion system protein VirB101e-1584.7
NC_008757:111292:1121411121411134391299Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeconjugation TrbI family protein4e-1582.8
NC_017063:834674:8455588455588467661209Helicobacter pylori ELS37 chromosome, complete genomeVirB10 type IV secretion protein5e-1582.8
NC_011498:1391788:1402591140259114038291239Helicobacter pylori P12, complete genomeVirB10 type IV secretion protein5e-1582.4
NC_014256:485969:5179145179145191221209Helicobacter pylori B8 chromosome, complete genometype IV secretion system protein VirB105e-1582.4
NC_017372:748097:7891127891127903141203Helicobacter pylori India7 chromosome, complete genometype IV secretion system protein VirB106e-1582.4
NC_017375:77142:9799997999992011203Helicobacter pylori 83 chromosome, complete genomeconjugal transfer protein TrbI8e-1582
NC_012026:1135041:1162590116259011639271338Anaplasma marginale str. Florida, complete genomeVirB10 protein (virB10)1e-1378.2
NC_012483:3731542:3778981377898137802521272Acidobacterium capsulatum ATCC 51196, complete genomeputative conjugal transfer protein, TrbI family1e-1377.8
NC_004842:1132441:1158480115848011598171338Anaplasma marginale str. St. Maries, complete genomeVirB10 protein1e-1377.8
NC_020301:1449616:1448453144845314496191167Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genometype IV secretion system protein VirB102e-1377.8
NC_020300:1344453:1344453134445313456161164Bartonella australis Aust/NH1, complete genometype IV secretion protein VblB102e-1377.4
NC_006831:4500:1563515635169751341Ehrlichia ruminantium str. Gardel, complete genomeVirB10 protein2e-1377
NC_005295:21995:3463334633359791347Ehrlichia ruminantium str. Welgevonden, complete genometype IV secretion system protein VirB104e-1376.3
NC_002978:4973:5784578472441461Wolbachia endosymbiont of Drosophila melanogaster, complete genometype IV secretion system protein VirB102e-1273.9
NC_017358:220900:2382162382162394511236Helicobacter pylori Cuz20 chromosome, complete genomecompetence protein2e-1273.9
NC_017361:930280:9621619621619633961236Helicobacter pylori SouthAfrica7 chromosome, complete genomecompetence protein4e-1273.2
NC_011498:448000:4809874809874822521266Helicobacter pylori P12, complete genomeVirB10 type IV secretion protein4e-1273.2
NC_012416:4973:5784578472801497Wolbachia sp. wRi, complete genometype IV secretion system protein VirB103e-1273.2
NC_007797:1451804:1463517146351714648211305Anaplasma phagocytophilum HZ, complete genometype IV secretion system protein VirB104e-1272.8
NC_017376:57500:8901489014902491236Helicobacter pylori SNT49 chromosome, complete genomecompetence protein4e-1272.8
NC_017361:1528239:1539861153986115411231263Helicobacter pylori SouthAfrica7 chromosome, complete genomeVirB10 type IV secretion protein5e-1272.4
NC_014555:1526775:1547587154758715488521266Helicobacter pylori PeCan4 chromosome, complete genomeVirB10 type IV secretion protein6e-1272.4
NC_011333:1040192:1056088105608810573231236Helicobacter pylori G27 chromosome, complete genomecompetence protein9e-1272
NC_017379:1035464:1048353104835310496181266Helicobacter pylori Puno135 chromosome, complete genomeVirB10 type IV secretion protein8e-1272
NC_010170:3908500:3923502392350239246351134Bordetella petrii, complete genometype IV secretion system protein VirB107e-1272
NC_017371:1030148:1039276103927610405231248Helicobacter pylori Gambia94/24 chromosome, complete genomecompetence protein1e-1171.6
NC_010698:870312:9022439022439034781236Helicobacter pylori Shi470, complete genomeComB3 protein1e-1171.2
NC_017367:278916:2946922946922959271236Helicobacter pylori F57, complete genomeComB3 protein2e-1170.9
NC_016929:825413:8398688398688413161449Rickettsia canadensis str. CA410 chromosome, complete genomehypothetical protein1e-1067.8
NC_009879:835227:8497528497528512001449Rickettsia canadensis str. McKiel, complete genomehypothetical protein4e-1066.2
NC_009254:365812:3718713718713730971227Burkholderia vietnamiensis G4 chromosome 3, complete sequenceconjugation TrbI family protein6e-1065.5
NC_010688:1908012:1933152193315219343211170Xanthomonas campestris pv. campestris, complete genometype IV secretion system putative channel component VirB47e-0962.4
NC_017271:2935643:2969405296940529706671263Xanthomonas campestris pv. raphani 756C chromosome, completeVirB10 protein7e-0962
NC_003902:2933121:2948624294862429498051182Xanthomonas campestris pv. campestris str. ATCC 33913, completeVirB10 protein1e-0861.2
NC_007086:1936505:1960414196041419615951182Xanthomonas campestris pv. campestris str. 8004, complete genomeVirB10 protein1e-0861.2
NC_012751:409333:418766418766419431666Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeVirB10 conjugal transfer protein3e-0860.1
NC_003919:3060484:3084400308440030855691170Xanthomonas axonopodis pv. citri str. 306, complete genomeVirB10 protein4e-0859.7
NC_014923:5765660:5774492577449257756341143Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeconjugation TrbI family protein9e-0858.5
NC_015675:6276357:6329163632916363303051143Mesorhizobium opportunistum WSM2075 chromosome, complete genomeconjugation TrbI family protein9e-0858.5
NC_019973:5694620:5703452570345257045941143Mesorhizobium australicum WSM2073, complete genometype IV secretory pathway, VirB10 component9e-0858.5
NC_013722:2150882:2162487216248721636621176Xanthomonas albilineans, complete genomeputative virb10 protein1e-0758.2
NC_016513:54802:6161261612628831272Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeconjugal transfer protein TrbI/VirB102e-0757.4
NC_008061:2106848:2113004211300421142271224Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceconjugation TrbI-like protein5e-0755.8
NC_010515:1124298:1130454113045411316771224Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceconjugation TrbI family protein8e-0755.5
NC_010943:3034366:3048752304875230500051254Stenotrophomonas maltophilia K279a, complete genomeputative putative bacterial secretion system protein8e-0755.5
NC_011001:372185:3870723870723882951224Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative type IV secretion system protein VirB102e-0654.3
NC_014500:1862000:189205418920541892221168Dickeya dadantii 3937 chromosome, complete genomeConjugative transfer protein TrbI2e-0654.3
NC_015947:2752450:2768815276881527700861272Burkholderia sp. JV3 chromosome, complete genomeconjugation TrbI family protein2e-0654.3
NC_011071:2733438:2750462275046227517151254Stenotrophomonas maltophilia R551-3, complete genomeconjugation TrbI family protein2e-0654.3