Pre_GI: BLASTP Hits

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Query: NC_013941:4470932:4503791 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Start: 4503791, End: 4504567, Length: 777

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:3701895:374769437476943748470777Escherichia coli O111:H- str. 11128, complete genomeputative T3SS structure protein EscT2e-131468
NC_013008:4643825:467543246754324676208777Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor2e-131468
NC_011353:4688000:471939147193914720167777Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus protein SpaR/YscT/HrcT2e-131468
NC_002695:4584177:461628746162874617063777Escherichia coli O157:H7 str. Sakai, complete genomeEscT2e-131468
NC_002655:4653160:468527046852704686046777Escherichia coli O157:H7 EDL933, complete genomeescT2e-131468
NC_011601:4096427:413005341300534130829777Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscT8e-131466
AP010958:3669500:370620037062003706976777Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscT1e-129462
NC_013353:3669500:370620037062003706976777Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscT1e-129462
NC_013361:5319497:533690553369055337681777Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscT1e-129462
NC_011094:1435347:146355914635591464338780Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein SpaR/YscT/HrcT3e-29129
NC_011080:1470794:149909514990951499874780Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein SpaR/YscT/HrcT1e-28127
NC_003198:1621347:162629616262961627075780Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative type III secretion protein1e-28127
NC_010067:1507823:151635415163541517133780Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-29127
NC_006511:1506915:151186415118641512643780Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative type III secretion protein6e-29127
NC_011147:1502096:150704515070451507824780Salmonella enterica subsp. enterica serovar Paratyphi A strtype III secretion protein6e-29127
NC_011149:1710601:171555017155501716329780Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein SpaR/YscT/HrcT6e-29127
NC_011205:1852665:185761418576141858393780Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus protein SpaR/YscT/HrcT2e-28126
NC_011274:1763676:176862517686251769404780Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type III secretion protein4e-28125
NC_016831:1236786:126502812650281265807780Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative type III secretion protein2e-28125
NC_011294:1723852:172880117288011729580780Salmonella enterica subsp. enterica serovar Enteritidis strtype III secretion protein5e-28124
NC_012125:2360815:236576423657642366543780Salmonella enterica subsp. enterica serovar Paratyphi C straintype III secretion protein6e-28124
NC_003197:1471349:149965514996551500434780Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein1e-27123
NC_016856:1481325:150963115096311510410780Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein1e-27123
NC_016860:1469066:149734214973421498121780Salmonella enterica subsp. enterica serovar Typhimurium strputative type III secretion protein1e-27123
NC_016863:1429516:145782214578221458601780Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein1e-27123
NC_010102:1616530:162147916214791622126648Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-27120
NC_016901:2661971:266197126619712662771801Shewanella baltica OS678 chromosome, complete genometype III secretion protein SpaR/YscT/HrcT2e-26119
NC_009997:2699644:270205427020542702854801Shewanella baltica OS195, complete genometype III secretion protein SpaR/YscT/HrcT2e-26119
NC_007645:3343815:335798933579893358774786Hahella chejuensis KCTC 2396, complete genomeType III secretory pathway, component EscT3e-1892
NC_007435:566436:587396587396588214819Burkholderia pseudomallei 1710b chromosome II, complete sequencetype III secretion protein SpaR/YscT/HrcT1e-1790.1
NC_009075:1906915:192599819259981926816819Burkholderia pseudomallei 668 chromosome II, complete sequencetype III secretion protein SpaR/YscT/HrcT1e-1790.1
NC_006351:1886475:190716619071661907984819Burkholderia pseudomallei K96243 chromosome 2, complete sequencetype III secretion-associated protein1e-1790.1
NC_012962:1189021:119456611945661195354789Photorhabdus asymbiotica, complete genometype iii secretion component protein sctt1e-1687
NC_005126:4423964:443916744391674439955789Photorhabdus luminescens subsp. laumondii TTO1, complete genomeType III secretion component protein SctT2e-1582.8
NC_008011:663958:669154669154669969816Lawsonia intracellularis PHE/MN1-00, complete genomeType III secretion component protein SctT6e-1477.8
NC_014366:2513352:251499225149922515783792Gamma proteobacterium HdN1, complete genomeType III secretory pathway protein4e-1375.1
NC_013361:3867558:388985638898563890623768Escherichia coli O26:H11 str. 11368 chromosome, complete genometype III secretion protein EpaR2e-1272.8
NC_013364:3552284:357458735745873575354768Escherichia coli O111:H- str. 11128, complete genometype III secretion protein EpaR2e-1272.8
NC_002678:5139557:516137151613715162189819Mesorhizobium loti MAFF303099, complete genometranslocation protein in type III secretion system, hrcT3e-1272.4
NC_010468:906957:917613917613918380768Escherichia coli ATCC 8739, complete genometype III secretion protein SpaR/YscT/HrcT3e-1272.4
NC_009800:2995958:302064530206453021412768Escherichia coli HS, complete genometype III secretion apparatus protein EpaR3e-1272.4
CP002516:903241:913892913892914659768Escherichia coli KO11, complete genometype III secretion protein SpaR/YscT/HrcT4e-1272
CP002185:3167738:319141731914173192184768Escherichia coli W, complete genometype III secretion system protein4e-1272
NC_011751:3285646:330819233081923308959768Escherichia coli UMN026 chromosome, complete genomeputative type III secretion protein EpaR4e-1272
NC_011415:3217796:324009432400943240861768Escherichia coli SE11 chromosome, complete genomeputative type III secretion protein4e-1272
NC_016902:903241:913892913892914659768Escherichia coli KO11FL chromosome, complete genometype III secretion protein SpaR/YscT/HrcT4e-1272
NC_017249:8283701:828370182837018284522822Bradyrhizobium japonicum USDA 6, complete genomeRhcT protein6e-1271.6
NC_011274:2881306:290805429080542908845792Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91virulence associated secretory protein9e-1270.9
NC_011205:3050235:307698730769873077778792Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus protein SpaR/YscT/HrcT9e-1270.9
NC_011147:2814664:284266228426622843453792Salmonella enterica subsp. enterica serovar Paratyphi A strvirulence secretory protein9e-1270.9
AP010958:3474077:349637434963743497141768Escherichia coli O103:H2 str. 12009 DNA, complete genometype III secretion protein EpaR9e-1270.9
NC_010102:2967464:299557229955722996363792Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-1270.9
NC_006511:2819128:284712628471262847917792Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCsecretory protein (associated with virulence)9e-1270.9
NC_003197:3005842:303259030325903033381792Salmonella typhimurium LT2, complete genomeneedle complex export protein9e-1270.9
NC_011080:2982346:300909430090943009885792Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein SpaR/YscT/HrcT9e-1270.9
NC_011149:2912219:294111629411162941907792Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein SpaR/YscT/HrcT9e-1270.9
CU928160:3030324:305262330526233053390768Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion protein EpaR9e-1270.9
CU928145:3196173:321850832185083219275768Escherichia coli 55989 chromosome, complete genomeputative Type III secretion protein EpaR9e-1270.9
NC_011748:3196173:321850832185083219275768Escherichia coli 55989, complete genomeputative Type III secretion protein EpaR9e-1270.9
NC_011294:2890500:291725029172502918041792Salmonella enterica subsp. enterica serovar Enteritidis strsecretory protein9e-1270.9
NC_011741:3030324:305262330526233053390768Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion protein EpaR9e-1270.9
NC_016832:2829767:285774628577462858537792Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Surface presentation of antigens protein spaR9e-1270.9
NC_004631:2842453:287044728704472871238792Salmonella enterica subsp. enterica serovar Typhi Ty2, completevirulence-associated secretory protein9e-1270.9
NC_003198:2856596:288459028845902885381792Salmonella enterica subsp. enterica serovar Typhi str. CT18,secretory protein (associated with virulence)9e-1270.9
NC_017046:3027161:305390630539063054697792Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system secretory apparatus9e-1270.9
NC_016863:2974333:300108030010803001871792Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex export protein9e-1270.9
NC_016860:3029272:305602030560203056811792Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus protein SpaR/YscT/HrcT9e-1270.9
NC_016857:3028421:305516630551663055957792Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex export protein9e-1270.9
NC_012125:2938519:296650129665012967292792Salmonella enterica subsp. enterica serovar Paratyphi C strainvirulence associated secretory protein9e-1270.9
NC_013353:3474077:349637434963743497141768Escherichia coli O103:H2 str. 12009, complete genometype III secretion protein EpaR9e-1270.9
NC_016810:3028421:305516630551663055957792Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system secretory apparatus9e-1270.9
NC_016831:2867766:289451428945142895305792Salmonella enterica subsp. enterica serovar Gallinarum/pullorumsecretory protein (associated with virulence)9e-1270.9
NC_016856:3026426:305282730528273053618792Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex export protein9e-1270.9
NC_011094:2913500:293978629397862940577792Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein SpaR/YscT/HrcT1e-1170.1
NC_009801:3175714:319800931980093198776768Escherichia coli E24377A, complete genometype III secretion apparatus protein EpaR3e-1168.9
NC_015761:2726000:275218927521892752980792Salmonella bongori NCTC 12419, complete genomevirulence associated secretory protein3e-1168.9
NC_009253:2615777:261684126168412617608768Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar biosynthesis protein FliR9e-1167.4
NC_009012:574145:595409595409596194786Clostridium thermocellum ATCC 27405, complete genometype III secretion system inner membrane R protein1e-1067
NC_014652:628435:650982650982651764783Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar biosynthetic protein flir2e-1066.6
NC_006905:2960260:298611829861182986909792Salmonella enterica subsp. enterica serovar Choleraesuis strsurface presentation of antigens; secretory proteins3e-1065.5
NC_014377:1089894:108913310891331089897765Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar biosynthetic protein FliR5e-1065.1
NC_013971:2876733:289699928969992897763765Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein5e-0961.6
NC_013961:851044:873537873537874301765Erwinia amylovora, complete genomeSurface presentation of antigens protein spaR5e-0961.6
NC_008346:983816:984925984925985686762Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeflagellar biosynthetic protein FliR2e-0860.1
NC_009664:533021:536377536377537201825Kineococcus radiotolerans SRS30216, complete genomeflagellar biosynthetic protein FliR2e-0859.3
NC_010694:2971170:299086429908642991628765Erwinia tasmaniensis, complete genomeSurface presentation of antigens protein (Spa29 protein), Type III secretion apparatus4e-0858.9
NC_015391:2059191:207640620764062077098693Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FliR1e-0653.5
NC_009617:4911595:4913794491379449156351842Clostridium beijerinckii NCIMB 8052 chromosome, complete genomebifunctional flagellar biosynthesis protein FliR/FlhB2e-0653.1
NC_018664:1663324:166832816683281669122795Clostridium acidurici 9a chromosome, complete genomeflagellar biosynthesis protein FliR2e-0653.1
NC_010694:2138000:215439321543932155121729Erwinia tasmaniensis, complete genomeType III secretion apparatus2e-0653.1
NC_014328:1135854:1144086114408611459061821Clostridium ljungdahlii ATCC 49587 chromosome, complete genomebifunctional flagellar biosynthesis proteins FliR/FlhB3e-0652.4
NC_013892:2689645:269080526908052691587783Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar biosynthetic protein, regulator3e-0652.4
NC_013722:1689125:172499717249971725767771Xanthomonas albilineans, complete genomeprobable xanthomonas secretion apparatus protein3e-0652.4
NC_020911:2921925:294200629420062942833828Octadecabacter antarcticus 307, complete genomeflagellar biosynthetic protein FliR4e-0652
NC_010501:4080937:409588040958804096656777Pseudomonas putida W619, complete genomeflagellar biosynthetic protein FliR6e-0651.2
NC_007508:479799:482317482317483147831Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeHrcT protein9e-0650.8
NC_002947:4931476:494658249465824947358777Pseudomonas putida KT2440, complete genomeflagellar biosynthesis protein1e-0550.8