Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:4080937 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
40809374081323387response regulator receiver proteinQuickGO ontologyBLASTP
40814164082156741RNA polymerase sigma 28 subunit FliAWhiGQuickGO ontologyBLASTP
40821534082986834Cobyrinic acid ac-diamide synthaseQuickGO ontologyBLASTP
408308040843871308GTP-binding signal recognition particle SRP54 G- domainQuickGO ontologyBLASTP
408439940865282130flagellar biosynthesis protein FlhAQuickGO ontologyBLASTP
40868904087633744transcriptional regulator GntR familyQuickGO ontologyBLASTP
408759340886871095D-alanine--D-alanine ligaseQuickGO ontologyBLASTP
408878140904091629hypothetical proteinBLASTP
409040240915771176CysMet metabolism pyridoxal-phosphate-dependent proteinQuickGO ontologyBLASTP
40916144092492879hypothetical proteinBLASTP
409250340936631161aminotransferase class VQuickGO ontologyBLASTP
40936654094579915D-alanine--D-alanine ligaseQuickGO ontologyBLASTP
409473540958771143flagellar biosynthetic protein FlhBQuickGO ontologyBLASTP
40958804096656777flagellar biosynthetic protein FliRQuickGO ontologyBLASTP
40966644096933270flagellar biosynthetic protein FliQQuickGO ontologyBLASTP
40969554097722768flagellar biosynthetic protein FliPQuickGO ontologyBLASTP
40977224098177456flagellar biosynthesis protein FliOQuickGO ontologyBLASTP
40981784098642465flagellar motor switch protein FliNQuickGO ontologyBLASTP
40986904099658969flagellar motor switch protein FliMQuickGO ontologyBLASTP
40996684100165498flagellar basal body-associated protein FliLQuickGO ontologyBLASTP
410029741016041308flagellar hook-length control proteinQuickGO ontologyBLASTP
41016774102015339Hpt proteinQuickGO ontologyBLASTP
410207341037671695response regulator receiver proteinQuickGO ontologyBLASTP
41037734104078306anti-sigma-factor antagonistQuickGO ontologyBLASTP
41041564104608453flagellar export protein FliJQuickGO ontologyBLASTP
410461541059731359flagellar protein export ATPase FliIQuickGO ontologyBLASTP
41059634106727765flagellar assembly protein FliHQuickGO ontologyBLASTP