Pre_GI Gene

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Host: NC_012962 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012962:1189021 Photorhabdus asymbiotica, complete genome

Host Lineage: Photorhabdus asymbiotica; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a North American clinical isolate from human blood. Photorhabdus asymbiota, formerly Xenorhabdus luminescens, has been isolated from human wound and blood infections often in association with spider bites. This species can also be isolated from the entomopathogenic nematode Heterorhabditis indica. Photorhabdus asymbiota is divided into two subspecies, subsp. australis which contains the Australian clinical isolates and subsp. asymbiota which contains the North American isolates. Photorhabdus is currently subdivided into three species, luminescens, temperate and asymbiotica all of which have been isolated as symbionts of heterorhabditid nematodes. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11890211189839819similar to the transcriptional activator protein exsavirfQuickGO ontologyBLASTP
1190568119066093hypothetical protein
11907031191101399hypothetical proteinBLASTP
119111111931412031type three secretion system effector proteinQuickGO ontologyBLASTP
11932371193374138hypothetical protein
119351711945691053type iii secretion component protein sctuQuickGO ontologyBLASTP
11945661195354789type iii secretion component protein scttQuickGO ontologyBLASTP
11953511195617267type iii secretion component protein sctsQuickGO ontologyBLASTP
11956201196273654type iii secretion component protein sctrQuickGO ontologyBLASTP
11962701197199930type iii secretion component protein sctqQuickGO ontologyBLASTP
119719611985241329type iii secretion component protein sctpQuickGO ontologyBLASTP
11985341198995462type iii secretion component protein sctoQuickGO ontologyBLASTP
119899212003171326type iii secretion component protein sctnQuickGO ontologyBLASTP
120054212016811140type iii secretion control protein sctwQuickGO ontologyBLASTP
12016781202049372putative type iii secretion proteinQuickGO ontologyBLASTP
12020461202411366type iii secretion protein sctxQuickGO ontologyBLASTP
12024141202743330type iii secretion protein sctyQuickGO ontologyBLASTP
120274012048632124type iii secretory apparatus protein pcrdQuickGO ontologyBLASTP
12048601205288429similar to transcription regulator proteins lcrr and pcrrQuickGO ontologyBLASTP
12053351205613279regulator in type iii secretion lssgQuickGO ontology
12056241206580957virulence-associated v antigen low calcium response locus protein vQuickGO ontologyBLASTP
12065901207099510yopbd chaperone sycdQuickGO ontologyBLASTP
120708012082581179hypothetical proteinBLASTP