Pre_GI Gene

Some Help

Host: NC_009012 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009012:574145 Clostridium thermocellum ATCC 27405, complete genome

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5741455762532109DNA topoisomerase IQuickGO ontologyBLASTP
5762555775651311gid proteinQuickGO ontologyBLASTP
578005578409405flagellar basal-body rod protein FlgBQuickGO ontologyBLASTP
578416578859444flagellar basal-body rod protein FlgCQuickGO ontologyBLASTP
578918579232315flagellar hook-basal body complex subunit FliEQuickGO ontologyBLASTP
5793185808711554flagellar M-ring protein FliFQuickGO ontologyBLASTP
5809235819451023flagellar motor switch protein FliGQuickGO ontologyBLASTP
581938582729792Flagellar biosynthesistype III secretory pathway protein-like proteinQuickGO ontologyBLASTP
5827745840871314flagellar protein export ATPase FliIQuickGO ontologyBLASTP
584109584567459flagellar export protein FliJQuickGO ontologyBLASTP
584629585459831hypothetical proteinBLASTP
5855045870901587flagellar hook-length control proteinQuickGO ontologyBLASTP
587106588077972flagellar hook capping proteinQuickGO ontologyBLASTP
588127588516390flagellar operon proteinQuickGO ontologyBLASTP
5886825900041323protein of unknown function DUF1078-like proteinQuickGO ontologyBLASTP
590140590430291flagellar proteinQuickGO ontologyBLASTP
590512591015504hypothetical protein
591028592014987flagellar motor switch protein FliMQuickGO ontologyBLASTP
5920165932361221CheC inhibitor of MCP methylationQuickGO ontologyBLASTP
593356593718363response regulator receiver proteinQuickGO ontologyBLASTP
593788594285498hypothetical protein
594275595057783flagellar biosynthetic protein FliPQuickGO ontologyBLASTP
595110595379270flagellar biosynthetic protein FliQQuickGO ontologyBLASTP
595409596194786type III secretion system inner membrane R proteinQuickGO ontologyBLASTP
5961915973691179flagellar biosynthetic protein FlhBQuickGO ontologyBLASTP
5974105994402031flagellar biosynthesis protein FlhAQuickGO ontologyBLASTP