Pre_GI: BLASTP Hits

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Query: NC_013716:3327881:3336615 Citrobacter rodentium ICC168, complete genome

Start: 3336615, End: 3337115, Length: 501

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:2272919:2286999228699922883121314Escherichia coli O103:H2 str. 12009, complete genomeside tail fiber protein3e-28124
AP010958:2272919:2286999228699922883121314Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative side tail fiber protein3e-28124
NC_013364:2522888:2537782253778225390951314Escherichia coli O111:H- str. 11128, complete genomeputative side tail fiber protein1e-27122
NC_013364:3312379:3317698331769833190111314Escherichia coli O111:H- str. 11128, complete genomeputative side tail fiber protein2e-27122
NC_011353:2892265:2892536289253628938491314Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail fiber protein4e-27120
NC_013008:2889743:2892830289283028941431314Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber protein4e-27120
NC_002695:2893951:2897038289703828983511314Escherichia coli O157:H7 str. Sakai, complete genomeputative tail fiber protein3e-27120
NC_013361:1896446:1913564191356419148771314Escherichia coli O26:H11 str. 11368 chromosome, complete genomeside tail fiber protein3e-27120
NC_013361:2169948:2172689217268921740021314Escherichia coli O26:H11 str. 11368 chromosome, complete genomeside tail fiber protein8e-27119
NC_013008:1761165:1777383177738317786961314Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber protein1e-26119
NC_013941:2425233:2440608244060824416361029Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeTail fiber protein2e-26118
NC_013361:1593543:1607835160783516091571323Escherichia coli O26:H11 str. 11368 chromosome, complete genomeside tail fiber protein4e-26117
NC_013941:1963523:1967201196720119685141314Escherichia coli O55:H7 str. CB9615 chromosome, complete genometail fiber protein encoded by prophage CP-933R4e-26117
NC_013941:1014386:1019885101988510212041320Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-26117
NC_013941:1613595:1619082161908216204011320Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein3e-26117
AP010958:867869:8726988726988740111314Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative side tail fiber protein2e-26117
NC_013353:867869:8726988726988740111314Escherichia coli O103:H2 str. 12009, complete genomeside tail fiber protein2e-26117
NC_011353:921500:9262229262229275381317Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail fiber protein8e-26116
NC_013008:918215:9278159278159291311317Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail component of prophage CP-933K8e-26116
NC_013941:338121:3429903429903443121323Escherichia coli O55:H7 str. CB9615 chromosome, complete genometail fiber protein8e-26116
NC_013364:1477248:1482376148237614836981323Escherichia coli O111:H- str. 11128, complete genomeputative side tail fiber protein7e-26116
NC_013361:3597812:3614648361464836159611314Escherichia coli O26:H11 str. 11368 chromosome, complete genomeside tail fiber protein7e-26116
NC_011601:756885:7659667659667672791314Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeside tail fiber protein5e-26116
NC_011601:1466496:1470788147078814720651278Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeside tail fiber protein1e-25115
NC_002695:917509:9228579228579241731317Escherichia coli O157:H7 str. Sakai, complete genomeputative tail fiber protein1e-25115
NC_002655:919654:9245029245029258241323Escherichia coli O157:H7 EDL933, complete genomeputative tail component of prophage CP-933K1e-25115
NC_013364:863209:8804598804598817721314Escherichia coli O111:H- str. 11128, complete genomeputative side tail fiber protein1e-25115
NC_011601:1077548:1082704108270410840171314Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeside tail fiber protein1e-25115
AP010958:1472506:1487276148727614885891314Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative side tail fiber protein9e-26115
NC_013353:1472506:1487276148727614885891314Escherichia coli O103:H2 str. 12009, complete genomeside tail fiber protein9e-26115
NC_013353:2134556:2145794214579421471071314Escherichia coli O103:H2 str. 12009, complete genomeside tail fiber protein8e-26115
NC_013353:1305712:1310836131083613121491314Escherichia coli O103:H2 str. 12009, complete genomeside tail fiber protein8e-26115
AP010958:2134556:2145794214579421471071314Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative side tail fiber protein8e-26115
AP010958:1305712:1310836131083613121491314Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative side tail fiber protein8e-26115
NC_013364:4990365:4994598499459849959111314Escherichia coli O111:H- str. 11128, complete genomeputative side tail fiber protein9e-26115
NC_011353:1195179:1212392121239212137471356Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail fiber protein6e-25113
NC_013364:1997891:2012222201222220135261305Escherichia coli O111:H- str. 11128, complete genomeputative side tail fiber protein9e-25112
NC_011353:1716037:1720530172053017218341305Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail fiber protein2e-24111
NC_013008:1715831:1719505171950517208091305Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber protein of cryptic prophage CP-933P2e-24111
NC_002655:2264773:2286934228693422882471314Escherichia coli O157:H7 EDL933, complete genomeputative tail fiber protein of cryptic prophage CP-933P2e-24111
NC_002695:1794635:1798930179893018002431314Escherichia coli O157:H7 str. Sakai, complete genomeputative tail fiber protein2e-24111
NC_002695:2655445:2670961267096126722741314Escherichia coli O157:H7 str. Sakai, complete genomeputative tail fiber protein2e-24111
NC_011353:1761977:177944217794421779720279Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail fiber protein3e-24110
NC_011353:2563056:2578572257857225798911320Escherichia coli O157:H7 str. EC4115 chromosome, complete genometail fiber protein4e-24110
NC_013008:2561586:2577552257755225788651314Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail fiber protein4e-24110
NC_002655:2730659:2746319274631927476381320Escherichia coli O157:H7 EDL933, complete genomeputative tail fiber protein of prophage CP-933U8e-24109
NC_002655:1909139:1926048192604819273671320Escherichia coli O157:H7 EDL933, complete genomeputative tail fiber protein of prophage CP-933O7e-22103