Pre_GI: BLASTP Hits

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Query: NC_013316:4018451:4036773 Clostridium difficile R20291, complete genome

Start: 4036773, End: 4037750, Length: 978

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009089:4140764:415845141584514159428978Clostridium difficile 630, complete genomeBirA bifunctional protein [includes: biotin operon repressor and biotin--[acetyl-CoA-carboxylase] synthetase0654
NC_018664:2459994:248115824811582482144987Clostridium acidurici 9a chromosome, complete genomebifunctional protein biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase BirA1e-82306
NC_009922:490500:500402500402501382981Alkaliphilus oremlandii OhILAs, complete genomebiotin--acetyl-CoA-carboxylase ligase8e-75280
NC_014410:615992:636077636077637057981Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,biotin/acetyl-CoA-carboxylase ligase3e-71269
NC_020134:2832857:2855412285541228564221011Clostridium stercorarium subsp. stercorarium DSM 8532, completebifunctional protein biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase BirA1e-64246
NC_007530:1459412:146990314699031470883981Bacillus anthracis str. 'Ames Ancestor', complete genomebira bifunctional protein3e-55215
NC_005945:1459357:146985714698571470837981Bacillus anthracis str. Sterne, complete genomebirA bifunctional protein3e-55215
NC_007503:2098980:212529321252932126279987Carboxydothermus hydrogenoformans Z-2901, complete genomeBirA bifunctional protein3e-55215
NC_015977:3324000:334446233444623345439978Roseburia hominis A2-183 chromosome, complete genomeputative transcriptional repressor of the biotin operon birA8e-55214
NC_010730:813534:820868820868821824957Sulfurihydrogenibium sp. YO3AOP1, complete genomebiotin/acetyl-CoA-carboxylase ligase3e-48192
NC_015172:775128:782332782332783330999Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase1e-46187
NC_016584:85543:880248802489004981Desulfosporosinus orientis DSM 765 chromosome, complete genomebiotin-(acetyl-CoA-carboxylase) ligase BirA4e-44178
NC_014393:4988127:500259050025905003393804Clostridium cellulovorans 743B chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase4e-44178
NC_014836:497350:5211065211065221161011Desulfurispirillum indicum S5 chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase3e-43176
NC_014297:1282302:130322413032241304147924Halalkalicoccus jeotgali B3 chromosome, complete genomebiotin--[acetyl-CoA-carboxylase] ligase6e-43174
NC_010001:3369500:338309933830993384076978Clostridium phytofermentans ISDg, complete genomebiotin--acetyl-CoA-carboxylase ligase1e-40166
NC_007907:225948:231384231384232364981Desulfitobacterium hafniense Y51, complete genomehypothetical protein9e-39160
NC_019903:83857:909179091791897981Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,biotin-(acetyl-CoA-carboxylase) ligase BirA4e-38159
NC_011295:1218792:122744012274401228045606Coprothermobacter proteolyticus DSM 5265, complete genomebiotin-[acetyl-CoA-carboxylase] ligase8e-38157
NC_014408:462195:462195462195462980786Methanothermobacter marburgensis str. Marburg chromosome, completebiotin ligase5e-37155
NC_020207:2575808:259161325916132592581969Enterococcus faecium NRRL B-2354, complete genomeBiotin-protein ligase, Biotin operon repressor1e-35150
NC_006511:4119332:413132641313264132288963Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCbiotin--protein ligase5e-34145
NC_003198:3586000:359255035925503593512963Salmonella enterica subsp. enterica serovar Typhi str. CT18,biotin--protein ligase5e-34145
NC_016938:336000:340981340981341937957Melissococcus plutonius DAT561 chromosome 1, complete genomebiotin--protein ligase4e-34145
CU928160:4248621:426222742622274263192966Escherichia coli IAI1 chromosome, complete genomebifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase and DNA-binding transcriptional repressor, bio-5'-AMP-binding4e-34145
NC_010468:4455201:445828244582824459247966Escherichia coli ATCC 8739, complete genomebifunctional BirA, biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase3e-34145
NC_010473:4256000:427080242708024271767966Escherichia coli str. K-12 substr. DH10B, complete genomebifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase and DNA-binding transcriptional repressor, bio-5'-AMP-binding3e-34145
NC_000913:4159090:417110541711054172070966Escherichia coli K12, complete genomebiotin--protein ligase3e-34145
NC_009515:705911:726156726156727073918Methanobrevibacter smithii ATCC 35061, complete genomebiotin-[acetyl-CoA-carboxylase] ligase/biotin operon regulator bifunctional protein, BirA3e-34145
NC_015516:1801500:181219218121921813166975Melissococcus plutonius ATCC 35311, complete genomebiotin-protein ligase/ biotin operon repressor2e-33143
NC_011750:4543135:455292745529274553892966Escherichia coli IAI39 chromosome, complete genomebiotin--protein ligase2e-33143
NC_007946:3683371:369106336910633692028966Escherichia coli UTI89, complete genomebifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor5e-33142
NC_000917:40111:733967339674295900Archaeoglobus fulgidus DSM 4304, complete genomebiotin operon repressor/biotin--[acetyl CoA carboxylase] ligase (birA)8e-33141
NC_002516:4747154:478747747874774788415939Pseudomonas aeruginosa PAO1, complete genomebiotin--protein ligase1e-32140
NC_011296:1542835:154283515428351543635801Thermodesulfovibrio yellowstonii DSM 11347, complete genomebiotin-[acetyl-CoA-carboxylase] ligase4e-30132
NC_016052:82358:878958789588854960Tetragenococcus halophilus NBRC 12172, complete genomeputative transcriptional regulator/biotin protein ligase4e-29129
NC_011528:767940:790159790159791130972Coxiella burnetii CbuK_Q154, complete genomebiotin operon repressor9e-29127
NC_009727:1001203:102432810243281025299972Coxiella burnetii Dugway 7E9-12, complete genomebifunctional protein birA9e-29127
NC_011527:953442:976348976348977319972Coxiella burnetii CbuG_Q212, complete genomebiotin operon repressor8e-29127
NC_000868:133451:150138150138150851714Pyrococcus abyssi GE5, complete genomebiotin--protein ligase2e-28126
NC_020419:923949:928863928863929813951Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completebiotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase2e-28126
NS_000191:923949:928863928863929813951Uncultured Termite group 1 bacterium phylotype Rs-D17, completebiotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase2e-28126
NC_007912:1173752:118056411805641181562999Saccharophagus degradans 2-40, complete genomeBiotin--(acetyl-CoA-carboxylase) ligase1e-27124
NC_010080:1885677:189390018939001894889990Lactobacillus helveticus DPC 4571, complete genomeBiotin--acetyl-CoA-carboxylase ligase4e-26119
NC_015602:1949610:195919919591991960188990Lactobacillus kefiranofaciens ZW3 chromosome, complete genomebiotin-[acetyl-CoA-carboxylase] ligase and biotin operon repressor5e-26118
NC_018528:1932000:194260919426091943598990Lactobacillus helveticus R0052 chromosome, complete genomebiotin-[acetyl-CoA-carboxylase] ligase and biotin operon repressor5e-26118
NC_016632:1637500:165877016587701659732963Serratia symbiotica str. 'Cinara cedri' chromosome, completebiotin--protein ligase2e-25116
NC_003413:1521080:155920615592061559943738Pyrococcus furiosus DSM 3638, complete genomebiotin operon repressor/biotin--[acetyl CoA carboxylase] ligase3e-25115
NC_011184:2723000:272422527242252725184960Vibrio fischeri MJ11 chromosome I, complete sequencebiotin-(acetyl-CoA-carboxylase) ligase9e-25114
NC_015947:280095:283006283006283974969Burkholderia sp. JV3 chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase9e-24110
NC_017955:4746441:476219947621994763023825Modestobacter marinus, complete genomebiotin-(Acetyl-CoA-carboxylase) ligase1e-23110
NC_007645:6350079:636514663651466366033888Hahella chejuensis KCTC 2396, complete genomeBiotin-(acetyl-CoA carboxylase) ligase3e-23109
NC_010376:49185:690506905069778729Finegoldia magna ATCC 29328, complete genomeputative biotin operon repressor3e-23109
NC_008340:480399:4950814950814960911011Alkalilimnicola ehrlichei MLHE-1, complete genomebiotin--acetyl-CoA-carboxylase ligase3e-22106
NC_008789:942309:947661947661948638978Halorhodospira halophila SL1, complete genomebiotin--acetyl-CoA-carboxylase ligase1e-20100
NC_014654:2138794:215858521585852159439855Halanaerobium sp. 'sapolanicus' chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase3e-2099.8
NC_014960:2111397:212663521266352127411777Anaerolinea thermophila UNI-1, complete genomebiotin--[acetyl-CoA-carboxylase] ligase7e-2098.2
NC_012560:582011:586093586093587085993Azotobacter vinelandii DJ, complete genomeBiotin--acetyl-CoA-carboxylase ligase, bifunctional protein, BirA4e-1995.9
NC_021150:582011:586093586093587085993Azotobacter vinelandii CA6, complete genomebiotin--protein ligase4e-1995.9
NC_015731:2950874:296098829609882961977990Nitrosomonas sp. Is79A3 chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase3e-1892.8
NC_007681:1007375:104803210480321048607576Methanosphaera stadtmanae DSM 3091, complete genomepartially conserved hypothetical protein2e-1790.1
NC_014109:393500:412673412673413329657Candidatus Riesia pediculicola USDA chromosome, complete genomebiotin-[acetyl-CoA-carboxylase] ligase8e-1788.2
NC_015571:722815:738618738618739391774Porphyromonas gingivalis TDC60, complete genomebiotin--acetyl-CoA-carboxylase ligase2e-1686.3
NC_004113:1137754:114219511421951142899705Thermosynechococcus elongatus BP-1, complete genomeputative biotin acetyl-CoA-carboxylase synthetase3e-1686.3
NC_015964:1389628:139437213943721395286915Haemophilus parainfluenzae T3T1, complete genomebifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase/ DNA-binding transcriptional repressor, bio-5'-AMP-binding6e-1685.1
NC_004344:589375:592203592203592970768Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein5e-1685.1
NC_011126:163878:175669175669176382714Hydrogenobaculum sp. Y04AAS1, complete genomebiotin/acetyl-CoA-carboxylase ligase2e-1583.2
NC_014655:1835848:183584818358481836597750Leadbetterella byssophila DSM 17132 chromosome, complete genomebiotin/acetyl-CoA-carboxylase ligase4e-1582.4
NC_016931:773871:786570786570787382813Rickettsia massiliae str. AZT80 chromosome, complete genomebiotin-(acetyl-CoA carboxylase) ligase4e-1582.4
NC_014909:219498:224807224807225577771Candidatus Blochmannia vafer str. BVAF chromosome, complete genomebiotin-(acetyl-CoA-carboxylase) synthetase1e-1480.9
NC_013407:10953:126701267013395726Methanocaldococcus vulcanius M7, complete genomebiotin/acetyl-CoA-carboxylase ligase4e-1479.3
NC_014640:6745873:674587367458736746826954Achromobacter xylosoxidans A8 chromosome, complete genomebiotin-[acetyl-CoA-carboxylase] ligase3e-1479.3
NC_014774:1019273:102246110224611023219759Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completebirA bifunctional protein2e-1377
NC_016516:1799521:180208118020811802920840Propionibacterium acnes TypeIA2 P.acn33 chromosome, completebifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor3e-1272.8
NC_016512:1810625:181062518106251811464840Propionibacterium acnes TypeIA2 P.acn17 chromosome, completebifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor3e-1272.8
NC_016511:1811171:181117118111711812010840Propionibacterium acnes TypeIA2 P.acn31 chromosome, completebifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor3e-1272.8
NC_006085:1859191:185919118591911860030840Propionibacterium acnes KPA171202, complete genomeputative BirA bifunctional protein3e-1272.8
NC_014039:1813205:181320518132051814044840Propionibacterium acnes SK137 chromosome, complete genomebiotin-(acetyl-CoA-carboxylase) ligase4e-1272.4
NC_017514:96911:1206251206251224031779Neisseria meningitidis M01-240149 chromosome, complete genomebiotin-(acetyl-CoA-carboxylase) ligase/transcriptional activator, Baf family4e-1272.4
NC_008782:4229306:424624642462464247103858Acidovorax sp. JS42, complete genomebiotin--acetyl-CoA-carboxylase ligase5e-1272
NC_008358:1789816:180126618012661802033768Hyphomonas neptunium ATCC 15444, complete genomebiotin--acetyl-CoA-carboxylase ligase8e-1271.2
NC_011992:3550566:356662735666273567484858Acidovorax ebreus TPSY, complete genomebiotin/acetyl-CoA-carboxylase ligase1e-1170.9
NC_005061:214168:218136218136218960825Candidatus Blochmannia floridanus, complete genomebifunctional protein: biotin operon repressor and biotin-[acetyl-CoA carboxylase] synthetase1e-1170.9
NC_007797:914500:930013930013930738726Anaplasma phagocytophilum HZ, complete genomebiotin--acetyl-CoA-carboxylase ligase2e-1066.6
NC_010981:1053533:106640010664001067236837Wolbachia pipientis, complete genomebiotin-[acetyl-coa-carboxylase] ligase3e-1066.2
NC_002978:918000:9305979305979316401044Wolbachia endosymbiont of Drosophila melanogaster, complete genomebiotin protein ligase, putative4e-0962.4
NC_013192:107672:127790127790128494705Leptotrichia buccalis DSM 1135, complete genomebiotin/acetyl-CoA-carboxylase ligase4e-0962.4
NC_012416:979484:990745990745991617873Wolbachia sp. wRi, complete genomebiotin-[acetyl-coa-carboxylase] ligase, putative7e-0858.5
NC_009614:2431005:245293324529332453700768Bacteroides vulgatus ATCC 8482 chromosome, complete genomebiotin-(acetyl-CoA carboxylase) synthetase2e-0757
NC_020409:437781:439933439933440853921Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeBiotin/acetyl-CoA-carboxylase ligase3e-0756.6
NC_017192:2114433:212877021287702129420651Arcobacter sp. L, complete genomebiotin--protein ligase2e-0756.6
NC_016893:218376:239280239280240071792Wigglesworthia glossinidia endosymbiont of Glossina morsitansbiotin-[acetylCoA carboxylase] holoenzyme synthetase/DNA-binding transcriptional repressor3e-0756.2
NC_009850:1601982:161315916131591613794636Arcobacter butzleri RM4018, complete genomebiotin--acetyl-CoA-carboxylase ligase5e-0755.5
NC_017187:1511567:152866615286661529301636Arcobacter butzleri ED-1, complete genomebiotin--protein ligase6e-0755.5
NC_007205:841818:863300863300863863564Candidatus Pelagibacter ubique HTCC1062, complete genomebiotin-protein ligase9e-0754.7