Pre_GI: BLASTP Hits

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Query: NC_011742:3057444:3060870 Escherichia coli S88 chromosome, complete genome

Start: 3060870, End: 3061958, Length: 1089

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:2965573:2969200296920029702791080Escherichia coli 536, complete genomehypothetical protein0673
NC_011283:942594:9435379435379446191083Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion protein5e-167587
NC_009648:3476000:3494988349498834960701083Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-163574
NC_017060:125480:1453521453521464341083Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion protein9e-109393
NC_015062:130359:1485221485221496041083Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencetype VI secretion protein, VC_A0111 family9e-109393
NC_012962:4427000:4432530443253044335611032Photorhabdus asymbiotica, complete genomehypothetical protein2e-108392
NC_013971:465318:4670514670514681331083Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein3e-102372
NC_005126:3812054:3811002381100238120901089Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein9e-101367
NC_013282:2026083:2055691205569120567731083Cronobacter turicensis, complete genomehypothetical protein3e-98358
NC_012962:3568046:3575095357509535761471053Photorhabdus asymbiotica, complete genomehypothetical protein2e-98358
NC_009381:1655731:1677437167743716785221086Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-97355
NC_004088:2937077:2960107296010729611921086Yersinia pestis KIM, complete genomehypothetical protein4e-97355
NC_014029:1760948:1760948176094817620331086Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-97355
NC_017168:3948514:3971543397154339726281086Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-97355
NC_017265:2557476:2580505258050525815901086Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-97355
NC_010501:3575726:3575726357572635768231098Pseudomonas putida W619, complete genometype VI secretion protein, VC_A0111 family4e-97354
NC_010465:2820500:2840999284099928420841086Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0111 family8e-97353
NC_009708:2788855:2810553281055328116381086Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-96352
NC_009778:1956225:1973284197328419743661083Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-96352
NC_014121:1822895:1842623184262318437081086Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein ImpH8e-90330
NC_012731:2302974:2326872232687223279571086Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-87322
NC_014837:3766426:3787464378746437885341071Pantoea sp. At-9b chromosome, complete genometype VI secretion protein6e-86317
NC_011283:2103500:2121133212113321222241092Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion protein3e-81302
NC_014306:4376012:4395682439568243967071026Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein2e-78293
NC_010552:592154:6143696143696154931125Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion protein, VC_A0111 family1e-49197
NC_007348:2011957:2032659203265920337081050Ralstonia eutropha JMP134 chromosome 2, complete sequenceProtein of unknown function DUF13059e-50197
NC_016626:400080:4282424282424293061065Burkholderia sp. YI23 plasmid byi_1p, complete sequencetype VI secretion protein2e-48193
NC_012721:1395417:1394299139429913954201122Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein8e-46184
NC_014539:3619511:3618414361841436195141101Burkholderia sp. CCGE1003 chromosome 1, complete sequencetype VI secretion protein1e-44181
NC_009255:1250939:1277183127718312781991017Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein4e-43175
NC_009255:2044291:2044291204429120453071017Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein4e-43175
NC_020260:1993344:200759120075912008268678Cronobacter sakazakii Sp291, complete genometype VI secretion protein9e-23108
NC_014228:4331327:4351521435152143525731053Xenorhabdus nematophila ATCC 19061, complete genomeconserved hypothetical protein (probable component of the SST VI cluster)2e-20100
NC_013892:274297:2742972742972753491053Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein5e-2099
NC_008570:1986466:200289620028962003894999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein3e-1996.3
NC_011274:1129686:1128634112863411297281095Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein8e-1994.7
NC_005126:349658:395492395492396472981Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-1893.2
NC_009348:2631759:2630791263079126317951005Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein3e-1892.8
NC_002947:4604582:4606312460631246073281017Pseudomonas putida KT2440, complete genomehypothetical protein1e-1791.3
NC_016822:267758:2667122667122677941083Shigella sonnei 53G, complete genomehypothetical protein2e-1790.1
NC_015968:4117835:414967541496754150631957Enterobacter asburiae LF7a chromosome, complete genometype VI secretion protein6e-1789
NC_013421:1143500:116200111620011162999999Pectobacterium wasabiae WPP163, complete genometype VI secretion protein, VC_A0111 family7e-1788.6
NC_013592:1424560:1442701144270114437141014Dickeya dadantii Ech586, complete genometype VI secretion protein, VC_A0111 family8e-1788.2
NC_011751:256830:2558172558172568661050Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-1687
NC_011742:258746:2577332577332587821050Escherichia coli S88 chromosome, complete genomehypothetical protein4e-1685.9
NC_007946:258747:2577342577342587831050Escherichia coli UTI89, complete genomehypothetical protein4e-1685.9
NC_008563:258725:2577122577122587611050Escherichia coli APEC O1, complete genomehypothetical protein4e-1685.9
NC_011745:258727:2577142577142587631050Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-1685.9
NC_008253:257059:2570592570592581081050Escherichia coli 536, complete genomehypothetical protein5e-1685.5
NC_014355:1865003:1896587189658718976511065Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-1377.4
NC_012913:1832500:184208218420821843080999Aggregatibacter aphrophilus NJ8700, complete genometype VI secretion protein, family2e-1377
NC_007963:2555012:255402325540232555015993Chromohalobacter salexigens DSM 3043, complete genomeprotein of unknown function DUF13052e-1376.6
NC_002947:3492379:3491345349134534924151071Pseudomonas putida KT2440, complete genomehypothetical protein5e-1375.9
NC_010322:3084834:3104873310487331059431071Pseudomonas putida GB-1 chromosome, complete genometype VI secretion protein7e-1375.1
NC_009656:3733913:3739524373952437405311008Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-1272.8
NC_007511:1780500:1799185179918518002881104Burkholderia sp. 383 chromosome 2, complete sequenceprotein of unknown function DUF13052e-1170.5
NC_004578:2797493:2811942281194228129491008Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein5e-1169.3
NC_012997:1689583:1703569170356917046841116Teredinibacter turnerae T7901, complete genometype VI secretion protein, VC_A0111 family3e-1066.6
NC_012779:2619871:2637980263798026390051026Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-1066.6
NC_008314:2744553:2743552274355227445981047Ralstonia eutropha H16 chromosome 2, complete sequencequinoprotein dehydrogenase4e-1065.9
NC_009436:3117661:3152243315224331546182376Enterobacter sp. 638, complete genomeImpA domain-containing protein2e-0963.5
NC_017265:4065625:407244640724464072733288Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein6e-0962
NC_017168:687471:694292694292694579288Yersinia pestis A1122 chromosome, complete genomehypothetical protein6e-0962
NC_009381:3680638:368748136874813687768288Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein6e-0962
NC_003143:398748:411235411235411522288Yersinia pestis CO92, complete genomehypothetical protein6e-0962
NC_008150:4373722:438054343805434380830288Yersinia pestis Antiqua, complete genomehypothetical protein6e-0962
NC_004088:4202247:420906842090684209355288Yersinia pestis KIM, complete genomehypothetical protein6e-0962
NC_008149:318860:330443330443330730288Yersinia pestis Nepal516, complete genomehypothetical protein6e-0962
NC_005810:4306716:431336043133604313647288Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein6e-0962
NC_018868:973379:9849389849389860801143Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein1e-0860.8
NC_006349:400807:4008074008074021771371Burkholderia mallei ATCC 23344 chromosome 2, complete sequencehypothetical protein3e-0860.1
NC_009079:402891:4028914028914043691479Burkholderia mallei NCTC 10247 chromosome I, complete sequencehypothetical protein3e-0860.1
NC_008835:1827905:1830848183084818323261479Burkholderia mallei NCTC 10229 chromosome I, complete sequencehypothetical protein3e-0860.1
NC_015663:4129685:4146811414681141478541044Enterobacter aerogenes KCTC 2190 chromosome, complete genometype VI secretion system protein ImpH4e-0859.3
NC_017075:2689014:2707126270712627081961071Rubrivivax gelatinosus IL144, complete genomehypothetical protein6e-0858.9
NC_016816:1823127:1842920184292018439691050Pantoea ananatis LMG 5342, complete genometype VI secretion system, core protein1e-0758.2
NC_017192:2216914:224035322403532241345993Arcobacter sp. L, complete genomehypothetical protein5e-0755.8
NC_014306:679888:6994466994467005101065Erwinia billingiae Eb661, complete genomeconserved uncharacterized protein7e-0755.5
NC_016514:2713834:2771045277104527720881044Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein1e-0654.7