Pre_GI: BLASTP Hits

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Query: NC_011149:309556:315805 Salmonella enterica subsp. enterica serovar Agona str. SL483,

Start: 315805, End: 316290, Length: 486

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Agona causes gastroenteritis in humans and is also pathogenic to swine and other food animals. This serovar is able to contain the Salmonella genomic island 1 multidrug resistance gene cluster. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1865681:1887460188746018895712112Salmonella enterica subsp. enterica serovar Gallinarum/pullorumRHS-family protein8e-26116
NC_011274:1129686:1135593113559311377042112Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91RHS family protein8e-26116
NC_011205:1227373:1227373122737312294872115Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853Vgr family type VI secretion system1e-24112
NC_011149:1110642:1114691111469111168322142Salmonella enterica subsp. enterica serovar Agona str. SL483,type VI secretion system Vgr family protein5e-24110
CU928160:256932:2606412606412627822142Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein, putative VgrG protein, Encoded within repeats that are hotspots for chromosomal duplication formation; Function of pro8e-1786.3
NC_002655:261236:2648622648622670032142Escherichia coli O157:H7 EDL933, complete genomehypothetical protein8e-1786.3
NC_011353:261220:2648462648462669872142Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeImpA family type VI secretion-associated protein8e-1786.3
NC_011741:256932:2606412606412627822142Escherichia coli IAI1 chromosome, complete genomehypothetical protein8e-1786.3
NC_013008:261226:2648522648522669932142Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein8e-1786.3
NC_013941:261094:2648042648042669452142Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeVgrG7e-1786.3
NC_016822:267758:2737422737422753581617Shigella sonnei 53G, complete genomeRhs element protein1e-1685.5
NC_007384:1763375:1780702178070217828102109Shigella sonnei Ss046, complete genomeunknown protein associated with Rhs element1e-1685.5
NC_016822:1839739:1859469185946918615772109Shigella sonnei 53G, complete genomeRhs element protein1e-1685.5
NC_007384:278810:2788102788102809512142Shigella sonnei Ss046, complete genomeunknown protein associated with Rhs element1e-1685.5
NC_010468:2406387:2419976241997624220842109Escherichia coli ATCC 8739, complete genometype VI secretion system Vgr family protein1e-1685.1
NC_002695:261235:2648612648612670022142Escherichia coli O157:H7 str. Sakai, complete genomeVgrG5e-1683.6
NC_020063:3352516:3367716336771633701032388Enterobacteriaceae bacterium strain FGI 57, complete genomeRhs element Vgr protein2e-1168.6
NC_020063:3104000:3123718312371831259792262Enterobacteriaceae bacterium strain FGI 57, complete genomeRhs element Vgr protein7e-1166.2
NC_011742:1528668:1539145153914515415502406Escherichia coli S88 chromosome, complete genomehypothetical protein7e-0959.7
NC_007946:1586656:1597133159713315995382406Escherichia coli UTI89, complete genomehypothetical protein7e-0959.7
NC_008563:1577879:1586052158605215884572406Escherichia coli APEC O1, complete genomehypothetical protein7e-0959.7
NC_011745:258727:2644632644632666942232Escherichia coli ED1a chromosome, complete genomeputative VgrG/E protein associated with Rhs elements9e-0959.3
NC_011751:1714131:1720875172087517232802406Escherichia coli UMN026 chromosome, complete genomeputative VgrG/E protein associated with Rhs elements1e-0859.3
NC_008253:257059:2638042638042657861983Escherichia coli 536, complete genomeVgr-like protein1e-0858.9
NC_008563:258725:2644572644572664391983Escherichia coli APEC O1, complete genomehypothetical protein2e-0858.5
NC_007946:258747:2644792644792664611983Escherichia coli UTI89, complete genomehypothetical protein2e-0858.5
NC_011742:258746:2644782644782664601983Escherichia coli S88 chromosome, complete genomehypothetical protein2e-0858.5
NC_004431:1713141:1716369171636917183271959Escherichia coli CFT073, complete genomehypothetical protein2e-0858.5
NC_004431:1713141:1722209172220917246142406Escherichia coli CFT073, complete genomehypothetical protein1e-0858.5
NC_011745:1581907:1590333159033315927382406Escherichia coli ED1a chromosome, complete genomeputative VgrG/E protein associated with Rhs elements3e-0857.8
NC_011751:256830:2625592625592645171959Escherichia coli UMN026 chromosome, complete genomeputative VgrG/E protein3e-0857.8
NC_015761:4188250:4211919421191942141052187Salmonella bongori NCTC 12419, complete genomeRhs family protein1e-0755.8
NC_009792:4017510:4032254403225440342542001Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-0755.5
NC_010634:4234932:4242979424297942451772199Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion system Vgr family protein2e-0755.1
NC_015761:2982000:2983139298313929852682130Salmonella bongori NCTC 12419, complete genomevgrS protein2e-0755.1
NC_010465:429095:4395884395884418102223Yersinia pseudotuberculosis YPIII, complete genometype VI secretion system Vgr family protein2e-0754.7
NC_006155:4302826:4302826430282643050242199Yersinia pseudotuberculosis IP 32953, complete genomeputative Rhs accessory genetic element4e-0753.9
NC_014228:3353896:3362421336242133645322112Xenorhabdus nematophila ATCC 19061, complete genomeRhs family protein4e-0753.9
NC_014228:3442159:3452111345211134541982088Xenorhabdus nematophila ATCC 19061, complete genomeputative VrgG protein4e-0753.9
NC_006155:4302826:4311861431186143140802220Yersinia pseudotuberculosis IP 32953, complete genomeputative Rhs accessory genetic element5e-0753.5
NC_012962:1068102:1110500111050011123951896Photorhabdus asymbiotica, complete genomehypothetical protein7e-0753.1
NC_008149:4053363:4061547406154740637452199Yersinia pestis Nepal516, complete genomeRhs accessory genetic element1e-0652.8
NC_005810:4469156:4477533447753344797312199Yersinia pestis biovar Microtus str. 91001, complete genomeputative Rhs accessory genetic element1e-0652.8
NC_009381:222735:2422112422112444092199Yersinia pestis Pestoides F chromosome, complete genomeRhs accessory genetic element1e-0652.8
NC_014029:3958811:3978308397830839805062199Yersinia pestis Z176003 chromosome, complete genomeputative Rhs accessory genetic element1e-0652.8
NC_017154:3898925:3918422391842239206202199Yersinia pestis D106004 chromosome, complete genomeputative Rhs accessory genetic element1e-0652.8
NC_017160:4073611:4081795408179540839932199Yersinia pestis D182038 chromosome, complete genomeputative Rhs accessory genetic element1e-0652.8
NC_009381:222735:2332242332242356142391Yersinia pestis Pestoides F chromosome, complete genomeRhs accessory genetic element1e-0652.8
NC_004088:266543:2747272747272768292103Yersinia pestis KIM, complete genomeVgrG-like protein1e-0652.4
NC_004088:266543:2835212835212859232403Yersinia pestis KIM, complete genomeVgrG-like protein1e-0652.4
NC_003143:4006884:4017382401738240197842403Yersinia pestis CO92, complete genomeputative Rhs accessory genetic element1e-0652.4
NC_008149:4053363:4070342407034240727442403Yersinia pestis Nepal516, complete genomeRhs accessory genetic element1e-0652.4
NC_005810:4469156:4486328448632844887302403Yersinia pestis biovar Microtus str. 91001, complete genomeputative Rhs accessory genetic element1e-0652.4
NC_014029:3958811:3969309396930939717112403Yersinia pestis Z176003 chromosome, complete genomeputative Rhs accessory genetic element1e-0652.4
NC_017154:3898925:3909423390942339118252403Yersinia pestis D106004 chromosome, complete genomeputative Rhs accessory genetic element1e-0652.4
NC_017160:4073611:4090590409059040929922403Yersinia pestis D182038 chromosome, complete genomeputative Rhs accessory genetic element1e-0652.4
NC_017168:1631052:1641550164155016439522403Yersinia pestis A1122 chromosome, complete genomeputative Rhs accessory genetic element1e-0652.4
NC_017265:4265659:4274456427445642768582403Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative Rhs accessory genetic element1e-0652.4
NC_003143:4006884:4026381402638140285792199Yersinia pestis CO92, complete genomeputative Rhs accessory genetic element1e-0652.4
NC_017168:1631052:1650549165054916527472199Yersinia pestis A1122 chromosome, complete genomeputative Rhs accessory genetic element1e-0652.4
NC_017265:4265659:4265659426565942678572199Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative Rhs accessory genetic element1e-0652.4
NC_009708:372422:3829483829483851702223Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeRhs element Vgr protein1e-0652
NC_014228:2883500:2906157290615729082712115Xenorhabdus nematophila ATCC 19061, complete genomeVgrG2e-0651.6
NC_014228:1336466:1347268134726813493822115Xenorhabdus nematophila ATCC 19061, complete genomeVgrG2e-0651.6
NC_005126:349658:3775813775813794911911Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-0651.6
NC_013892:1457500:1467053146705314691192067Xenorhabdus bovienii SS-2004 chromosome, complete genomeVrg family protein3e-0651.2
NC_014500:3097362:3136161313616131380141854Dickeya dadantii 3937 chromosome, complete genomeputative Rhs accessory genetic element4e-0650.4
NC_012912:1701231:1718568171856817204211854Dickeya zeae Ech1591, complete genometype VI secretion system Vgr family protein5e-0650.4
NC_014500:894136:9121299121299139821854Dickeya dadantii 3937 chromosome, complete genomeputative Rhs accessory genetic element6e-0650.1
NC_017506:923500:9236149236149257342121Marinobacter adhaerens HP15 chromosome, complete genomeImpA family type VI secretion-associated protein6e-0650.1