Pre_GI Gene

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Host: NC_015761 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015761:4188250 Salmonella bongori NCTC 12419, complete genome

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
418825041978439594large repetitive proteinQuickGO ontologyBLASTP
41980704198516447membrane proteinQuickGO ontologyBLASTP
419852141995281008hypothetical proteinBLASTP
419951842007351218hypothetical proteinBLASTP
420073742019721236type-I secretion proteinQuickGO ontologyBLASTP
42019624202408447hypothetical proteinBLASTP
420240142043801980ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
42045844204871288GerE family regulatory proteinQuickGO ontologyBLASTP
42048684205743876araC family regulatory proteinQuickGO ontologyBLASTP
42070584207453396hypothetical protein
421191942141052187Rhs family proteinQuickGO ontologyBLASTP
4215162421523473tRNA-PheQuickGO ontologyBLASTP
42153504215925576transcriptional regulatorQuickGO ontologyBLASTP
421596242176651704thioldisulfide interchange protein DsbDQuickGO ontologyBLASTP
42176414217988348periplasmic divalent cation tolerance protein CutAQuickGO ontologyBLASTP