Pre_GI Gene

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Host: NC_011205 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011205:1227373 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
122737312294872115Vgr family type VI secretion systemQuickGO ontologyBLASTP
122958912338064218hypothetical proteinBLASTP
12347531234896144hypothetical proteinBLASTP
12361221236421300IS3 OrfAQuickGO ontologyBLASTP
12374091238188780hypothetical proteinBLASTP
12387911239108318hypothetical proteinBLASTP
12396481239860213cold-shock proteinQuickGO ontologyBLASTP
12403181240716399outer membrane protein NQuickGO ontologyBLASTP
12422121242490279outer membrane protein NQuickGO ontologyBLASTP
12425701243265696hypothetical proteinBLASTP
124333912447691431DNA cytosine methylaseQuickGO ontologyBLASTP
12447501245220471very short patch repair proteinQuickGO ontologyBLASTP
12452091246129921hypothetical proteinBLASTP
12463051247216912hypothetical proteinBLASTP
124764312493551713cellulose synthesis regulatory proteinQuickGO ontologyBLASTP
12493341250170837mannosyl-3-phosphoglycerate phosphataseQuickGO ontologyBLASTP