Pre_GI: BLASTP Hits

Some Help

Query: NC_011205:1227373:1240318 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1240318, End: 1240716, Length: 399

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:1110642:1126504112650411277151212Salmonella enterica subsp. enterica serovar Agona str. SL483,outer membrane protein N3e-71266
NC_017046:2026672:2034498203449820356941197Salmonella enterica subsp. enterica serovar Typhimurium str. 798outer membrane protein S11e-56218
NC_016863:2029340:2037166203716620383621197Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative porin1e-56218
NC_016857:2027311:2035137203513720363331197Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative porin1e-56218
NC_016856:2085283:2088974208897420901701197Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative porin1e-56218
NC_016810:2027311:2035137203513720363331197Salmonella enterica subsp. enterica serovar Typhimurium strouter membrane protein S11e-56218
NC_011274:1129686:1153689115368911548851197Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91outer membrane protein S15e-56215
NC_016831:1865681:1870280187028018714761197Salmonella enterica subsp. enterica serovar Gallinarum/pullorumouter membrane protein S12e-55213
NC_013716:2139952:2145537214553721467121176Citrobacter rodentium ICC168, complete genomeOuter membrane porin protein6e-55212
NC_016832:948029:9818009818009829841185Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Outer membrane porin protein ompD2e-53207
NC_004631:948054:9841259841259853091185Salmonella enterica subsp. enterica serovar Typhi Ty2, completeouter membrane protein S12e-53207
NC_011741:2091249:2095731209573120969481218Escherichia coli IAI1 chromosome, complete genomePorin OmpN6e-52202
CU928160:2091249:2095731209573120969481218Escherichia coli IAI1 chromosome, complete genomePorin OmpN6e-52202
NC_013941:2425233:2428383242838324295701188Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein6e-52202
NC_015761:1970042:1977884197788419790741191Salmonella bongori NCTC 12419, complete genomeouter membrane protein S11e-51201
NC_013008:2561586:256579925657992566374576Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeouter membrane protein3e-51200
NC_011353:2563056:256681825668182567393576Escherichia coli O157:H7 str. EC4115 chromosome, complete genome3e-51200
NC_002695:2655445:265920726592072659782576Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-51200
NC_000913:2028472:203286320328632033267405Escherichia coli K12, complete genome3e-51199
NC_002655:2730659:273442127344212734996576Escherichia coli O157:H7 EDL933, complete genomeputative outer membrane protein2e-50197
NC_010498:1210145:1224155122415512253181164Escherichia coli SMS-3-5, complete genomeporin family protein4e-47186
NC_011415:2248417:2252020225202022531831164Escherichia coli SE11 chromosome, complete genomeputative porin4e-47186
NC_013364:2522888:2526040252604025272031164Escherichia coli O111:H- str. 11128, complete genomeputative outer membrane pore protein4e-47186
NC_016822:2201388:221146522114652211830366Shigella sonnei 53G, complete genomeputative outer membrane pore protein1e-46184
NC_011283:1901229:1915691191569119168361146Klebsiella pneumoniae 342 chromosome, complete genomeporin3e-44176
NC_008563:1505405:1522248152224815233811134Escherichia coli APEC O1, complete genomeouter membrane pore protein N, non-specific8e-44175
NC_013361:1896446:1918777191877719199101134Escherichia coli O26:H11 str. 11368 chromosome, complete genomeouter membrane pore protein N9e-44175
NC_012947:2366000:2369930236993023710631134Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeporin Gram-negative type9e-44175
NC_015663:4906652:4912147491214749132891143Enterobacter aerogenes KCTC 2190 chromosome, complete genomeouter membrane pore protein S12e-43174
NC_014121:1848971:1862509186250918636181110Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeouter membrane pore protein N, non-specific1e-43174
NC_013716:1756545:1760425176042517615581134Citrobacter rodentium ICC168, complete genomeouter membrane protein N (porin)1e-43174
NC_016612:4119410:4119410411941041205161107Klebsiella oxytoca KCTC 1686 chromosome, complete genomeouter membrane pore protein N, non-specific5e-43172
NC_015062:58826:647326473265292561Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence2e-42170
NC_017060:59500:648716487165473603Rahnella aquatilis HX2 plasmid PRA1, complete sequenceouter membrane pore protein N, non-specific4e-42169
NC_016514:2476359:2480816248081624819251110Enterobacter cloacae EcWSU1 chromosome, complete genomeouter membrane protein N6e-42169
NC_020063:2449554:2453423245342324545921170Enterobacteriaceae bacterium strain FGI 57, complete genomeouter membrane protein (porin)4e-41166
NC_013941:699286:7138747138747149561083Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeouter membrane porin protein C2e-37154
NC_011751:643976:6614176614176624991083Escherichia coli UMN026 chromosome, complete genomeputative outer membrane porin5e-37152
NC_008563:1175035:1193929119392911950711143Escherichia coli APEC O1, complete genomeouter membrane porin protein NmpC precursor4e-37152
NC_007946:1239278:1256542125654212576841143Escherichia coli UTI89, complete genomeouter membrane porin protein NmpC precursor4e-37152
NC_004431:1401681:1420007142000714211491143Escherichia coli CFT073, complete genomeOuter membrane porin protein nmpC precursor4e-37152
NC_011742:1177946:1197451119745111985931143Escherichia coli S88 chromosome, complete genomeouter membrane porin4e-37152
NC_011748:824367:8366178366178376991083Escherichia coli 55989, complete genomeouter membrane porin; DLP12 prophage2e-36150
CU928145:824367:8366178366178376991083Escherichia coli 55989 chromosome, complete genomeouter membrane porin; DLP12 prophage2e-36150
NC_011740:1991941:1996644199664419977471104Escherichia fergusonii ATCC 35469, complete genomeouter membrane porin; DLP12 prophage7e-36149
NC_011294:2334979:2359510235951023606461137Salmonella enterica subsp. enterica serovar Enteritidis strouter membrane porin protein C5e-36149
NC_011415:2153243:2153243215324321543251083Escherichia coli SE11 chromosome, complete genomeputative outer membrane porin protein4e-36149
NC_011274:2325840:235037923503792351347969Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91outer membrane protein C4e-36149
NC_008258:1784637:1791372179137217924721101Shigella flexneri 5 str. 8401, complete genomeputative outer membrane porin protein9e-34142
NC_004741:1823000:1828994182899418300941101Shigella flexneri 2a str. 2457T, complete genomeputative outer membrane porin protein8e-34142
NC_017328:1835108:1844591184459118456911101Shigella flexneri 2002017 chromosome, complete genomeputative outer membrane porin protein8e-34142
NC_010498:1700447:1705762170576217068621101Escherichia coli SMS-3-5, complete genomeporin family protein8e-34142
NC_007384:1737885:1745537174553717466371101Shigella sonnei Ss046, complete genomeputative outer membrane porin protein8e-34142
NC_016822:1818897:1824859182485918259591101Shigella sonnei 53G, complete genomeouter membrane porin protein8e-34142
NC_004337:1783645:1792048179204817931481101Shigella flexneri 2a str. 301, complete genomeputative outer membrane porin protein6e-34142
NC_014121:1101093:1103964110396411050161053Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeouter membrane phosphoporin protein E3e-33140
NC_002695:2056545:2066351206635120674511101Escherichia coli O157:H7 str. Sakai, complete genomeputaive outer membrane porin protein3e-33140
NC_002655:2015000:2021022202102220221221101Escherichia coli O157:H7 EDL933, complete genomeputative outer membrane porin protein3e-33140
NC_011353:1971145:1980951198095119820511101Escherichia coli O157:H7 str. EC4115 chromosome, complete genomegram-negative porin family protein3e-33140
NC_013008:1971662:1979927197992719810271101Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeouter membrane porin protein3e-33140
NC_016514:891772:8958698958698969211053Enterobacter cloacae EcWSU1 chromosome, complete genomeouter membrane pore protein E3e-33140
NC_011750:1809943:1822110182211018232101101Escherichia coli IAI39 chromosome, complete genomeouter membrane porin protein ompD3e-33140
NC_015566:3659318:3676851367685136779691119Serratia sp. AS12 chromosome, complete genomeporin1e-32137
NC_013941:1857724:1870815187081518719151101Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeGram-negative porin family2e-32137
NC_013716:357928:3596823596823607341053Citrobacter rodentium ICC168, complete genomeouter membrane pore protein E4e-32136
NC_007606:1515403:152571215257121526020309Shigella dysenteriae Sd197, complete genomehypothetical protein2e-31134
NC_011745:291422:2931642931642942191056Escherichia coli ED1a chromosome, complete genomeouter membrane phosphoporin protein E2e-30131
NC_004431:364000:3663973663973674581062Escherichia coli CFT073, complete genomeOuter membrane pore protein E precursor2e-30131
NC_007946:289425:2912382912382922991062Escherichia coli UTI89, complete genomeouter membrane pore protein E precursor2e-30131
NC_008563:287136:2912172912172922781062Escherichia coli APEC O1, complete genomeouter membrane pore protein E precursor2e-30131
NC_011742:291237:2912372912372922921056Escherichia coli S88 chromosome, complete genomeouter membrane phosphoporin protein E2e-30131
NC_007384:307013:3110233110233120781056Shigella sonnei Ss046, complete genomeouter membrane pore protein E (E,Ic,NmpAB)3e-30130
NC_013361:313540:3175503175503186051056Escherichia coli O26:H11 str. 11368 chromosome, complete genomeouter membrane phosphoporin protein E3e-30130
NC_010498:301000:3028133028133038681056Escherichia coli SMS-3-5, complete genomeouter membrane pore protein E3e-30130
NC_021066:3028421:3030950303095030320021053Raoultella ornithinolytica B6, complete genomeouter membrane phosphoporin protein E7e-30129
NC_010473:623810:6276016276016286401040Escherichia coli str. K-12 substr. DH10B, complete genome6e-30129
NC_000913:558920:5749815749815761081128Escherichia coli K12, complete genomeDLP12 prophage; truncated outer membrane porin (pseudogene)6e-30129
AC_000091:558920:5749815749815761081128Escherichia coli W3110 DNA, complete genome6e-30129
NC_014618:3700640:3715169371516937162661098Enterobacter cloacae SCF1 chromosome, complete genomeporin4e-30129
NC_013282:923500:9260759260759271601086Cronobacter turicensis, complete genomeOuter membrane pore protein E4e-30129
NC_010473:498252:5130845130845153802297Escherichia coli str. K-12 substr. DH10B, complete genome1e-29128
NC_017328:303987:3057293057293067841056Shigella flexneri 2002017 chromosome, complete genomeOuter membrane pore protein E1e-29128
NC_016856:365665:3656653656653667171053Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Souter membrane phosphoporin protein E9e-30128
NC_016860:364981:3649813649813660331053Salmonella enterica subsp. enterica serovar Typhimurium strouter membrane porin E9e-30128
NC_006905:368942:3689423689423699941053Salmonella enterica subsp. enterica serovar Choleraesuis strouter membrane pore protein e (e,ic,nmpab)9e-30128
NC_016832:2581145:2602679260267926037311053Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Outer membrane pore protein E4e-29126
NC_020064:1409596:1409596140959614106931098Serratia marcescens FGI94, complete genomeouter membrane protein (porin)4e-29126
NC_009648:293052:3200013200013210291029Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeouter membrane phosphoporin protein E9e-29125
NC_012731:1088321:1105013110501311060651053Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeouter membrane phosphoporin protein E8e-29125
NC_011283:4438500:4441282444128244423341053Klebsiella pneumoniae 342 chromosome, complete genomeouter membrane phosphoporin protein E8e-29125
NC_020260:3004500:3019080301908030201501071Cronobacter sakazakii Sp291, complete genomeouter membrane phosphoporin protein E8e-29125
NC_015061:2770856:2785809278580927869211113Rahnella sp. Y9602 chromosome, complete genomeporin Gram-negative type3e-28123
NC_020064:2779864:2792369279236927934481080Serratia marcescens FGI94, complete genomeouter membrane protein (porin)1e-27121
CP002516:1902431:1919201191920119203161116Escherichia coli KO11, complete genomeporin Gram-negative type2e-27120
CP002185:2181936:2185539218553921866541116Escherichia coli W, complete genome2e-27120
NC_016902:1902431:1919201191920119203161116Escherichia coli KO11FL chromosome, complete genomeporin2e-27120
NC_008563:2041345:2041345204134520424901146Escherichia coli APEC O1, complete genomeOuter membrane protein N precursor2e-27120
NC_013961:2370994:2399119239911924002251107Erwinia amylovora, complete genomeOuter membrane protein 1B precursor2e-27120
NC_013971:2408522:2436647243664724377531107Erwinia amylovora ATCC 49946 chromosome, complete genomeouter membrane protein C2e-27120
NC_020063:3690308:3744533374453337455971065Enterobacteriaceae bacterium strain FGI 57, complete genomeouter membrane protein (porin)4e-27119
NC_007613:1038000:105747910574791057976498Shigella boydii Sb227, complete genomeputative outer membrane porin protein C precurser8e-27119
NC_014121:2745097:2764515276451527655701056Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeOmpF porin1e-26118
NC_013353:2272919:2273321227332122743941074Escherichia coli O103:H2 str. 12009, complete genomeouter membrane porin protein2e-26117
NC_009801:2159123:2163636216363621647091074Escherichia coli E24377A, complete genomeouter membrane protein homolog2e-26117
AP010958:2272919:2273321227332122743941074Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted outer membrane porin protein2e-26117
NC_009800:2049346:205414120541412054344204Escherichia coli HS, complete genomeouter membrane protein, truncation1e-25115
NC_016612:5208936:5214784521478452158541071Klebsiella oxytoca KCTC 1686 chromosome, complete genomeporin7e-25112
NC_011740:1991941:1995018199501819960731056Escherichia fergusonii ATCC 35469, complete genomeOuter membrane protein N precursor (porin)2e-24111
NC_008253:1938975:1938975193897519400331059Escherichia coli 536, complete genomeputative outer membrane pore protein1e-23108
NC_004431:2185750:2185750218575021868771128Escherichia coli CFT073, complete genomeOuter membrane protein N precursor1e-23108
NC_015663:3466471:3477376347737634784821107Enterobacter aerogenes KCTC 2190 chromosome, complete genomeporin7e-23105
NC_014500:2934232:2942238294223829433411104Dickeya dadantii 3937 chromosome, complete genomeouter membrane porin 1a (Ia;b;F)9e-22102
NC_014500:2934232:2943874294387429449801107Dickeya dadantii 3937 chromosome, complete genomeouter membrane protein F4e-21100
NC_021066:601029:6145096145096155791071Raoultella ornithinolytica B6, complete genomeouter membrane protein F1e-2098.2
NC_014500:2934232:2945973294597329470611089Dickeya dadantii 3937 chromosome, complete genomeouter membrane protein F9e-1372.4
NC_017328:2090679:209197120919712092180210Shigella flexneri 2002017 chromosome, complete genomeputative outer membrane protein1e-0961.6
NC_008258:2045000:204503720450372045246210Shigella flexneri 5 str. 8401, complete genomeputative outer membrane protein1e-0961.6
NC_004741:2009769:201304720130472013256210Shigella flexneri 2a str. 2457T, complete genomeputative outer membrane protein1e-0961.6
NC_017328:2090679:208986720898672090754888Shigella flexneri 2002017 chromosome, complete genomehypothetical protein3e-0857.4
NC_004741:2009769:201094320109432011830888Shigella flexneri 2a str. 2457T, complete genomeputative outer membrane pore protein3e-0857.4
NC_004337:3590323:360597936059793606866888Shigella flexneri 2a str. 301, complete genomeputative outer membrane pore protein3e-0857.4