Pre_GI: BLASTP Hits

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Query: NC_011205:1227373:1246305 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1246305, End: 1247216, Length: 912

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2026672:202881120288112029722912Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-156552
NC_016863:2029340:203147920314792032390912Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein1e-156552
NC_016857:2027311:202945020294502030361912Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Inner membrane protein yedI1e-156552
NC_016810:2027311:202945020294502030361912Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-156552
NC_015761:1970042:1972188197218819732491062Salmonella bongori NCTC 12419, complete genomeintegral membrane protein1e-149529
NC_013716:2139952:213995221399522140797846Citrobacter rodentium ICC168, complete genomehypothetical protein2e-139494
CP002516:1902431:192501019250101925927918Escherichia coli KO11, complete genomeprotein of unknown function DUF8085e-137487
NC_016902:1902431:192501019250101925927918Escherichia coli KO11FL chromosome, complete genomehypothetical protein5e-137487
NC_010498:1210145:123001012300101230921912Escherichia coli SMS-3-5, complete genomehypothetical protein1e-136486
NC_016822:2201388:220432622043262205243918Shigella sonnei 53G, complete genomehypothetical protein1e-136485
NC_012947:1769438:180797118079711808888918Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein6e-136483
AC_000091:2027648:203058620305862031503918Escherichia coli W3110 DNA, complete genomeconserved inner membrane protein6e-136483
NC_011283:1901229:192142719214271922338912Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein5e-131467
NC_016612:5208936:520919152091915210102912Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein5e-130464
NC_021066:601029:620293620293621204912Raoultella ornithinolytica B6, complete genomehypothetical protein2e-127454
NC_015663:4906652:490665249066524907563912Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-119428
NC_014562:1883517:188351718835171884428912Pantoea vagans C9-1 chromosome, complete genomeInner membrane protein yedI2e-110398
NC_014306:3006028:300602830060283006939912Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein9e-102370
NC_008260:3053775:305792730579273058859933Alcanivorax borkumensis SK2, complete genomehypothetical protein2e-77289
NC_015637:325561:325561325561326472912Vibrio anguillarum 775 chromosome chromosome II, complete sequencehypothetical protein5e-70264
NC_013222:3060482:308416730841673085030864Robiginitalea biformata HTCC2501, complete genomehypothetical protein2e-54212
NC_013441:27877:551235512356097975Gordonia bronchialis DSM 43247, complete genomeprotein of unknown function DUF8087e-45181
NC_013169:2045000:2057888205788820589881101Kytococcus sedentarius DSM 20547, complete genomehypothetical protein6e-45181
NC_017192:1841987:1871540187154018726521113Arcobacter sp. L, complete genomehypothetical protein1e-44180
NC_015673:1794590:179792617979261798870945Corynebacterium resistens DSM 45100 chromosome, complete genomehypothetical protein2e-35149
NC_014391:4570567:4575483457548345765201038Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein3e-31135
NC_013016:656000:657583657583658413831Neisseria meningitidis alpha14 chromosome, complete genomehypothetical protein1e-29130
NC_003112:744476:746054746054746809756Neisseria meningitidis MC58, complete genomehypothetical protein1e-29130