Pre_GI: BLASTP Hits

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Query: NC_011205:1227373:1242212 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1242212, End: 1242490, Length: 279

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:948054:985960985960986271312Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-47186
NC_016832:948029:983668983668983946279Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Outer membrane protein N7e-47185
NC_016831:1865681:186932018693201869598279Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein7e-47185
NC_011149:1110642:112839811283981128676279Salmonella enterica subsp. enterica serovar Agona str. SL483,outer membrane protein N7e-47185
NC_016810:2027311:203418820341882034487300Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-45179
NC_016856:2085283:208802520880252088324300Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein4e-45179
NC_016857:2027311:203418820341882034487300Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein4e-45179
NC_016863:2029340:203621720362172036516300Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein4e-45179
NC_017046:2026672:203354920335492033815267Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein9e-45178
NC_009801:2159123:216270321627032163086384Escherichia coli E24377A, complete genomehypothetical protein4e-1890.1
NC_011415:2248417:225108822510882251471384Escherichia coli SE11 chromosome, complete genomehypothetical protein4e-1890.1
NC_010498:1210145:122594912259491226251303Escherichia coli SMS-3-5, complete genomehypothetical protein4e-1890.1
CP002516:1902431:192094619209461921248303Escherichia coli KO11, complete genomehypothetical protein4e-1890.1
NC_012947:1769438:180391618039161804218303Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein4e-1890.1
NC_016902:1902431:192094619209461921248303Escherichia coli KO11FL chromosome, complete genomehypothetical protein4e-1890.1
NC_013716:2139952:214463621446362144923288Citrobacter rodentium ICC168, complete genomehypothetical protein4e-1890.1
NC_000913:2028472:203114320311432031508366Escherichia coli K12, complete genomepredicted inner membrane protein4e-1889.7
NC_010473:2119480:212215121221512122516366Escherichia coli str. K-12 substr. DH10B, complete genomepredicted inner membrane protein4e-1889.7
CU928160:2091249:209482920948292095194366Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein4e-1889.7
AC_000091:2027648:203525620352562035621366Escherichia coli W3110 DNA, complete genomepredicted inner membrane protein4e-1889.7
NC_011741:2091249:209482920948292095194366Escherichia coli IAI1 chromosome, complete genomehypothetical protein4e-1889.7
NC_012759:1920955:192362619236261923991366Escherichia coli BW2952 chromosome, complete genomeputative inner membrane protein4e-1889.7
NC_013364:2522888:252510825251082525473366Escherichia coli O111:H- str. 11128, complete genomehypothetical protein4e-1889.7
NC_013941:2425233:242745324274532427818366Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-1889.7
NC_016822:2201388:220895822089582209323366Shigella sonnei 53G, complete genomehypothetical protein4e-1889.7
NC_021066:601029:616195616195616476282Raoultella ornithinolytica B6, complete genomehypothetical protein2e-1580.9
NC_016612:5208936:521387552138755214156282Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative outer membrane protein N precursor1e-1478.6
NC_015663:4906652:491132049113204911601282Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative outer membrane protein N8e-1475.9
NC_011740:1991941:199408719940871994374288Escherichia fergusonii ATCC 35469, complete genomeputative inner membrane protein similar to yedR, putative permease1e-1375.1
NC_011353:2563056:256533225653322565577246Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-1271.2
NC_013008:2561586:256431325643132564621309Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeinner membrane protein3e-1270.9
NC_002655:2730659:273293527329352733243309Escherichia coli O157:H7 EDL933, complete genomehypothetical protein3e-1270.9
NC_002695:2655445:265772126577212658047327Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-1270.9
NC_011283:1901229:191737519173751917656282Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-1064.3