Pre_GI: BLASTP Hits

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Query: NC_011205:1227373:1238456 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1238456, End: 1238734, Length: 279

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1865681:187305918730591873337279Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-48191
NC_011274:1129686:115171311517131152105393Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-48191
NC_011149:1110642:112464211246421124920279Salmonella enterica subsp. enterica serovar Agona str. SL483,1e-46184
NC_014500:3097362:312943531294353130361927Dickeya dadantii 3937 chromosome, complete genomehypothetical protein1e-1375.1
NC_013592:1668092:167299016729901673916927Dickeya dadantii Ech586, complete genomehypothetical protein2e-1374.3
NC_012912:1701231:172714717271471728073927Dickeya zeae Ech1591, complete genomehypothetical protein2e-1271.2
NC_008150:1420825:142268114226811423103423Yersinia pestis Antiqua, complete genomehypothetical protein1e-1168.9
NC_004088:2640440:267677426767742677196423Yersinia pestis KIM, complete genomehypothetical protein1e-1168.9
NC_005810:1794490:179634617963461796768423Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-1168.9
NC_003143:2137945:213960221396022139967366Yersinia pestis CO92, complete genomehypothetical protein1e-1168.9
NC_016845:3448881:346487434648743465800927Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-1168.6
NC_012731:3411161:342715534271553428081927Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-1168.6
NC_006155:1916426:191752119175211918447927Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-1168.6
NC_010634:1916000:191750519175051918431927Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-1168.6
NC_011283:1811000:185368618536861854603918Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-1167.8
NC_013592:2968500:299268229926822993596915Dickeya dadantii Ech586, complete genomehypothetical protein3e-0960.5
NC_013421:1819036:184201518420151842929915Pectobacterium wasabiae WPP163, complete genomehypothetical protein5e-0960.1
NC_017047:2079368:208488220848822085808927Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein4e-0753.1