Pre_GI Gene

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Host: NC_015761 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015761:2982000 Salmonella bongori NCTC 12419, complete genome

Host Lineage: Salmonella bongori; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella bongori is the second species of Salmonella after Salmonella enterica and is considered a distant outgroup. This species is reptile-specific, is rarely found in human infections and it lacks SPI-2. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2982018298209073tRNA-PheQuickGO ontologyBLASTP
298313929852682130vgrS proteinQuickGO ontologyBLASTP
298528729865341248hypothetical proteinBLASTP
29865442986780237hypothetical proteinBLASTP
29868042987643840hypothetical proteinBLASTP
29879032988832930hypothetical proteinBLASTP
29888992989885987hypothetical proteinBLASTP
298990029909221023hypothetical proteinBLASTP
299091929919741056hypothetical proteinBLASTP
299195829931121155hypothetical proteinBLASTP
29931312994129999hypothetical proteinBLASTP
29941452995059915hypothetical protein
29951232995437315DNA-binding proteinQuickGO ontology
29960612996471411hypothetical proteinBLASTP
29974902998413924hypothetical proteinBLASTP
29984532999172720hydrolaseQuickGO ontologyBLASTP
300025430015581305hexuronate transporterQuickGO ontologyBLASTP
300196330031471185D-mannonate hydrolaseQuickGO ontologyBLASTP
300325830047301473D-mannonate oxidoreductaseQuickGO ontologyBLASTP
300474230061541413glucuronate isomeraseQuickGO ontologyBLASTP
30062623007170909membrane permeaseQuickGO ontologyBLASTP
300738030089301551glycosyl hydrolaseQuickGO ontologyBLASTP
300893030103571428membrane transport proteinQuickGO ontologyBLASTP