Pre_GI: BLASTP Hits

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Query: NC_010673:205500:218194 Borrelia hermsii DAH, complete genome

Start: 218194, End: 218772, Length: 579

Host Lineage: Borrelia hermsii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated from a case of relapsing fever in western Washington, USA. Borrelia hermsii is the causative agent of tick-borne relapsing fever in the western United States and Canada. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another. These plasmids carry genes involved in antigenic variation and pathogenicity.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011244:213853:230861230861231439579Borrelia recurrentis A1, complete genomeelongation factor EF-P2e-82304
NC_010741:546573:568865568865569428564Treponema pallidum subsp. pallidum SS14, complete genometranslation elongation factor P3e-36151
NC_000919:545141:567433567433567996564Treponema pallidum subsp. pallidum str. Nichols, complete genometranslation elongation factor P (efp)3e-36151
NC_016842:546661:568954568954569517564Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeelongation factor P3e-36151
NC_016843:547149:569442569442570005564Treponema pallidum subsp. pertenue str. Gauthier chromosome,elongation factor P3e-36151
NC_016844:547069:569362569362569925564Treponema pallidum subsp. pallidum DAL-1 chromosome, completeelongation factor P3e-36151
NC_016848:547115:569408569408569971564Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeelongation factor P3e-36151
NC_017268:546376:568669568669569232564Treponema pallidum subsp. pallidum str. Chicago chromosome,translation elongation factor P3e-36151
NC_021508:546592:568885568885569448564Treponema pallidum subsp. pallidum SS14, complete genomeelongation factor P3e-36151
NC_015714:542679:564978564978565541564Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeelongation factor P2e-36151
NC_016803:465453:483095483095483652558Desulfovibrio desulfuricans ND132 chromosome, complete genometranslation elongation factor P2e-23108
NC_016629:3308329:332045833204583321015558Desulfovibrio africanus str. Walvis Bay chromosome, completeelongation factor P7e-23106
NC_005303:272915:317585317585318154570Onion yellows phytoplasma OY-M, complete genometranslation elongation factor EF-P9e-22103
NC_020409:437781:463208463208463765558Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeElongation factor P5e-21100
NC_016630:864601:879660879660880217558Filifactor alocis ATCC 35896 chromosome, complete genometranslation elongation factor P2e-2098.6
NC_013939:420500:437277437277437846570Deferribacter desulfuricans SSM1, complete genometranslation elongation factor P6e-2097.1
NC_015737:2691246:271688127168812717438558Clostridium sp. SY8519, complete genomehypothetical protein1e-1996.3
NC_012796:2683711:268696826869682687525558Desulfovibrio magneticus RS-1, complete genomeelongation factor P1e-1995.9
NC_007712:532500:555270555270555836567Sodalis glossinidius str. 'morsitans', complete genomeelongation factor P2e-1995.5
NC_006055:456711:476265476265476822558Mesoplasma florum L1, complete genometranslation elongation factor P2e-1995.5
NC_014560:171931:180497180497181060564Helicobacter pylori SJM180 chromosome, complete genomeelongation factor P2e-1995.5
NC_009648:4958500:497728549772854977851567Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeelongation factor P3e-1994.7
NC_013850:4993307:499643149964314996997567Klebsiella variicola At-22 chromosome, complete genometranslation elongation factor P3e-1994.7
NC_011283:5170683:517306351730635173629567Klebsiella pneumoniae 342 chromosome, complete genomeelongation factor P3e-1994.7
NC_012731:403670:422415422415422981567Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeelongation factor P3e-1994.7
NC_016845:411844:430919430919431485567Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,elongation factor P3e-1994.7
NC_015663:1934863:194912519491251949691567Enterobacter aerogenes KCTC 2190 chromosome, complete genomeelongation factor P4e-1994.4
NC_020181:3518396:352150435215043522070567Enterobacter aerogenes EA1509E, complete genomeTranslation elongation factor P4e-1994.4
NC_015696:47484:600606006060629570Francisella sp. TX077308 chromosome, complete genometranslation elongation factor P4e-1994.4
NC_016612:1840325:185898618589861859552567Klebsiella oxytoca KCTC 1686 chromosome, complete genomeelongation factor P1e-1892.8
NC_013124:1784117:179990917999091800478570Acidimicrobium ferrooxidans DSM 10331, complete genometranslation elongation factor P2e-1892
NC_015672:1921023:194763419476341948206573Flexistipes sinusarabici DSM 4947 chromosome, complete genomeElongation factor P2e-1891.7
NC_013521:1976331:199696919969691997532564Sanguibacter keddieii DSM 10542, complete genometranslation elongation factor P (EF-P)3e-1891.3
NC_015499:119200:128263128263128832570Thermodesulfobium narugense DSM 14796 chromosome, complete genomeElongation factor P4e-1891.3
NC_002771:606491:626345626345626908564Mycoplasma pulmonis UAB CTIP, complete genomeelongation factor P1e-1789.7
NC_014652:666227:677993677993678550558Caldicellulosiruptor hydrothermalis 108 chromosome, completetranslation elongation factor p2e-1789
NC_015949:2002752:201260520126052013162558Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeElongation factor P3e-1788.2
NC_009952:2217877:221787722178772218518642Dinoroseobacter shibae DFL 12, complete genometranslation elongation factor P3e-1788.2
NC_015321:4142843:415646541564654157031567Fluviicola taffensis DSM 16823 chromosome, complete genometranslation elongation factor P (EF-P)4e-1787.8
NC_020411:278000:291115291115291699585Hydrogenobaculum sp. HO, complete genometranslation elongation factor P7e-1787
NC_015587:278000:291119291119291703585Hydrogenobaculum sp. SHO chromosome, complete genometranslation elongation factor P7e-1787
NC_015557:278000:291083291083291667585Hydrogenobaculum sp. 3684 chromosome, complete genomeElongation factor P7e-1787
NC_011661:1049767:105685710568571057414558Dictyoglomus turgidum DSM 6724, complete genometranslation elongation factor P6e-1787
NC_003366:2106937:210915821091582109715558Clostridium perfringens str. 13, complete genomeelongation factor P3e-1684.7
NC_014935:342491:344338344338344901564Nitratifractor saLSUginis DSM 16511 chromosome, complete genometranslation elongation factor p (ef-p)4e-1684.7
NC_003911:1265972:131316313131631313726564Silicibacter pomeroyi DSS-3, complete genomeelongation factor P4e-1684.3
NC_016001:2421580:244366424436642444230567Flavobacterium branchiophilum, complete genomeelongation factor P (EF-P)5e-1684.3
NC_015702:2902934:290293429029342903503570Parachlamydia acanthamoebae UV7, complete genomeelongation factor P 21e-1583.2
NC_000117:845141:884508884508885080573Chlamydia trachomatis D/UW-3/CX, complete genomeelongation factor P1e-1582.8
NC_012225:2523262:252457725245772525140564Brachyspira hyodysenteriae WA1, complete genometranslation elongation factor P (EF-P)1e-1582.8
NC_017243:2778427:279092227909222791485564Brachyspira intermedia PWS/A chromosome, complete genometranslation elongation factor P (EF-P)2e-1582.4
NC_015501:1200411:122101212210121221578567Porphyromonas asaccharolytica DSM 20707 chromosome, completeElongation factor P2e-1582.4
NC_009997:2585588:260324126032412603801561Shewanella baltica OS195, complete genometranslation elongation factor P2e-1582
NC_016901:2542110:256315825631582563718561Shewanella baltica OS678 chromosome, complete genometranslation elongation factor P2e-1582
NC_010729:1549744:156549015654901566056567Porphyromonas gingivalis ATCC 33277, complete genomeelongation factor P2e-1582
NC_015571:2273503:227458122745812275147567Porphyromonas gingivalis TDC60, complete genomeelongation factor P2e-1582
NC_015711:8909256:891475389147538915331579Myxococcus fulvus HW-1 chromosome, complete genomeelongation factor P3e-1581.6
NC_008255:1764585:178653517865351787095561Cytophaga hutchinsonii ATCC 33406, complete genomeelongation factor P (EF-P)3e-1581.3
NC_002950:1334500:135198313519831352549567Porphyromonas gingivalis W83, complete genomeelongation factor P5e-1580.9
NC_011979:3045952:305291330529133053476564Geobacter sp. FRC-32, complete genometranslation elongation factor P6e-1580.5
NC_009483:2489000:250404125040412504604564Geobacter uraniireducens Rf4 chromosome, complete genomeelongation factor P7e-1580.5
NC_007793:1633080:164441816444181644975558Staphylococcus aureus subsp. aureus USA300, complete genometranslation elongation factor P1e-1479.7
NC_007298:2170181:218586521858652186422558Dechloromonas aromatica RCB, complete genomeelongation factor P2e-1479
NC_008095:7139056:714452971445297145107579Myxococcus xanthus DK 1622, complete genometranslation elongation factor P2e-1479
NC_011565:385454:398743398743399306564Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,elongation factor P3e-1478.6
NC_005061:65861:765787657877141564Candidatus Blochmannia floridanus, complete genomeelongation factor P (EF-P)3e-1478.2
NC_007109:1105251:110855611085561109122567Rickettsia felis URRWXCal2, complete genomeelongation factor P3e-1478.2
NC_014219:2491021:250029925002992500856558Bacillus selenitireducens MLS10 chromosome, complete genometranslation elongation factor P4e-1477.8
NC_015064:2871152:288988328898832890458576Acidobacterium sp. MP5ACTX9 chromosome, complete genometranslation elongation factor P6e-1477
NC_013204:2955500:297659129765912977151561Eggerthella lenta DSM 2243, complete genometranslation elongation factor P9e-1476.6
NC_013222:2595315:259625125962512596820570Robiginitalea biformata HTCC2501, complete genomeelongation factor P1e-1376.3
NC_017187:1923733:192940319294031929963561Arcobacter butzleri ED-1, complete genomeelongation factor P2e-1375.9
NC_008344:1364142:136662613666261367183558Nitrosomonas eutropha C91, complete genometranslation elongation factor P2e-1375.9
NC_014834:3130715:318949531894953190061567Rhodopseudomonas palustris DX-1 chromosome, complete genometranslation elongation factor P4e-1374.3
NC_014166:455378:470858470858471421564Arcobacter nitrofigilis DSM 7299 chromosome, complete genometranslation elongation factor P4e-1374.3
NC_009488:903000:917679917679918248570Orientia tsutsugamushi str. Boryong, complete genomeelongation factor P1e-1273.2
NC_006677:215466:251029251029251595567Gluconobacter oxydans 621H, complete genomeProtein Translation Elongation Factor P (EF-P)2e-1272.4
NC_014734:2285762:230771623077162308279564Paludibacter propionicigenes WB4 chromosome, complete genometranslation elongation factor p (ef-p)2e-1272
NC_002936:797110:798044798044798610567Dehalococcoides ethenogenes 195, complete genometranslation elongation factor P3e-1271.6
NC_007951:3655088:368735136873513687908558Burkholderia xenovorans LB400 chromosome 1, complete sequenceElongation factor P (EF-P)4e-1270.9
NC_004545:15650:230042300423573570Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeelongation factor P5e-1270.9
NC_015276:1531159:153896015389601539526567Marinomonas mediterranea MMB-1 chromosome, complete genomeElongation factor P-like protein5e-1270.9
NC_002162:333303:340721340721341287567Ureaplasma parvum serovar 3 str. ATCC 700970, complete genomeelongation factor P6e-1270.5
NC_012026:415447:425464425464426030567Anaplasma marginale str. Florida, complete genomeelongation factor P EF-P (efp)2e-1169.3
NC_015740:2614317:261821326182132618779567Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeelongation factor P2e-1168.9
NC_011146:482440:490423490423490986564Geobacter bemidjiensis Bem, complete genometranslation elongation factor P5e-1167.4
NC_014973:4630132:464782946478294648392564Geobacter sp. M18 chromosome, complete genometranslation elongation factor P7e-1167
NC_013169:1290000:130333713033371303951615Kytococcus sedentarius DSM 20547, complete genometranslation elongation factor P (EF-P)8e-1166.6
NC_003062:2506959:252689125268912527460570Agrobacterium tumefaciens str. C58 chromosome circular, completeelongation factor P1e-1066.2
NC_003304:2507000:252700425270042527573570Agrobacterium tumefaciens str. C58 chromosome circular, completeelongation factor P1e-1066.2
NC_014638:1509637:151500815150081515571564Bifidobacterium bifidum PRL2010 chromosome, complete genomeprotein translation elongation Factor P (EF-P)1e-1066.2
NC_015183:2483653:250699425069942507563570Agrobacterium sp. H13-3 chromosome, complete genomeelongation factor P1e-0963.2
NC_015381:1173603:117526911752691175826558Burkholderia gladioli BSR3 chromosome 1, complete sequenceTranslation elongation factor P1e-0962.8
NC_014121:3553809:356793235679323568504573Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeelongation factor P2e-0962.4
NC_010513:1443787:146200814620081462574567Xylella fastidiosa M12 chromosome, complete genomeelongation factor P3e-0961.6
NC_010577:1456909:147590914759091476475567Xylella fastidiosa M23, complete genomeelongation factor P-like protein YeiP4e-0961.2
NC_009439:2337024:235230123523012352873573Pseudomonas mendocina ymp, complete genometranslation initiation factor 5A (eIF-5A)2e-0858.9
NC_016782:1316467:132717513271751327738564Corynebacterium diphtheriae 241 chromosome, complete genomeelongation factor P4e-0858.2
NC_016783:1313008:135147413514741352037564Corynebacterium diphtheriae INCA 402 chromosome, complete genomeelongation factor P4e-0858.2
NC_016785:1297208:130875813087581309321564Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeelongation factor P4e-0858.2
NC_016786:1316436:132714513271451327708564Corynebacterium diphtheriae HC01 chromosome, complete genomeelongation factor P4e-0858.2
NC_016787:1276983:131659313165931317156564Corynebacterium diphtheriae HC03 chromosome, complete genomeelongation factor P4e-0858.2
NC_016788:1315877:132658513265851327148564Corynebacterium diphtheriae HC04 chromosome, complete genomeelongation factor P4e-0858.2
NC_016789:1334514:137298213729821373545564Corynebacterium diphtheriae PW8 chromosome, complete genomeelongation factor P4e-0858.2
NC_016790:1259356:129397512939751294538564Corynebacterium diphtheriae VA01 chromosome, complete genomeelongation factor P4e-0858.2
NC_016799:1343020:138262713826271383190564Corynebacterium diphtheriae 31A chromosome, complete genomeelongation factor P4e-0858.2
NC_016800:1344189:135573913557391356302564Corynebacterium diphtheriae BH8 chromosome, complete genomeelongation factor P4e-0858.2
NC_016801:1361597:137230213723021372865564Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeelongation factor P4e-0858.2
NC_016802:1317365:132807413280741328637564Corynebacterium diphtheriae HC02 chromosome, complete genomeelongation factor P4e-0858.2
NC_002935:1315019:135348313534831354046564Corynebacterium diphtheriae NCTC 13129, complete genomeelongation factor P4e-0858.2
NC_015410:2838132:284474428447442845283540Pseudomonas mendocina NK-01 chromosome, complete genometranslation initiation factor 5A5e-0857.8
NC_017265:2807302:282495628249562825528573Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Translation elongation factor P-relatedprotein3e-0755.1
NC_010634:1565788:156712115671211567693573Yersinia pseudotuberculosis PB1/+, complete genomeelongation factor P-like protein YeiP3e-0755.1
NC_005810:1413305:143097314309731431545573Yersinia pestis biovar Microtus str. 91001, complete genomeelongation factor P3e-0755.1
NC_010465:3046904:306460830646083065180573Yersinia pseudotuberculosis YPIII, complete genomeelongation factor P-like protein YeiP3e-0755.1
NC_003143:1441211:144254414425441443116573Yersinia pestis CO92, complete genomeelongation factor P3e-0755.1
NC_008149:3022970:304061530406153041187573Yersinia pestis Nepal516, complete genomeelongation factor P3e-0755.1
NC_006155:1567306:156863915686391569211573Yersinia pseudotuberculosis IP 32953, complete genomeelongation factor P3e-0755.1
NC_009381:2731965:274960927496092750181573Yersinia pestis Pestoides F chromosome, complete genomeelongation factor P3e-0755.1
NC_009708:3035798:305349030534903054062573Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeelongation factor P3e-0755.1
NC_017168:4363000:436460443646044365176573Yersinia pestis A1122 chromosome, complete genomeelongation factor P3e-0755.1
NC_004088:3186954:320453832045383205179642Yersinia pestis KIM, complete genomeelongation factor P3e-0754.7
NC_017160:1299733:131716013171601317774615Yersinia pestis D182038 chromosome, complete genomeelongation factor P4e-0754.7
NC_017154:1454704:145603714560371456651615Yersinia pestis D106004 chromosome, complete genomeelongation factor P4e-0754.7
NC_014029:1512605:151393815139381514552615Yersinia pestis Z176003 chromosome, complete genomeelongation factor P4e-0754.7
NC_010159:1558000:155941215594121560026615Yersinia pestis Angola, complete genome4e-0754.7