Pre_GI Gene

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Host: NC_000117 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_000117:845141 Chlamydia trachomatis D/UW-3/CX, complete genome

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Isolated from the cervix of an asymptomatic female. Opportunistic pathogen. Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes. This is a trachoma biovar, serovar D strain.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
8451418464871347hypothetical protein
846872847537666hypothetical protein
8476428490091368D-AlaGly PermeaseQuickGO ontologyBLASTP
849067849519453hypothetical proteinBLASTP
849528850187660SET Domain proteinQuickGO ontologyBLASTP
850184850972789metal dependent hydrolaseQuickGO ontologyBLASTP
8509768533752400Cell Division Protein FtsKQuickGO ontologyBLASTP
85355585362874tRNA-HisQuickGO ontology
854128855677155016S ribosomal RNAQuickGO ontologyBLASTP
855993858862287023S ribosomal RNAQuickGO ontologyBLASTP
8589828590981175S ribosomal RNAQuickGO ontologyBLASTP
8596158609101296Na-translocating NADH-quinone reductase subunit FQuickGO ontologyBLASTP
861053861397345preprotein translocase subunit YajCQuickGO ontologyBLASTP
8615028626921191rRNA MethyltransferseQuickGO ontologyBLASTP
862880863257378Histone-Like Developmental ProteinQuickGO ontology
8636538661182466CHLTR possible phosphoproteinQuickGO ontology
8661138673871275protoporphyrinogen oxidaseQuickGO ontologyBLASTP
8673848687571374coproporphyrinogen III oxidaseQuickGO ontologyBLASTP
8687308697401011uroporphyrinogen decarboxylaseQuickGO ontologyBLASTP
8697538729923240Transcription-Repair CouplingQuickGO ontologyBLASTP
8729688755952628alanyl-tRNA synthetaseQuickGO ontologyBLASTP
876174877723155016S ribosomal RNAQuickGO ontologyBLASTP
878039880902286423S ribosomal RNAQuickGO ontologyBLASTP
8810278811431175S ribosomal RNAQuickGO ontologyBLASTP
8814228834222001transketolaseQuickGO ontologyBLASTP
883419884288870AMP nucleosidaseQuickGO ontologyBLASTP
884508885080573elongation factor PQuickGO ontologyBLASTP
885096885320225hypothetical protein
885367886239873phosphohydrolaseQuickGO ontologyBLASTP
8863208878581539HSP60QuickGO ontologyBLASTP
88793688800671tRNA-CysQuickGO ontology
8883068896581353UDP-N-acetylmuramoylalanyl-D-glutamyl-2 6-diaminoligaseQuickGO ontologyBLASTP
8898048908141011phospho-N-acetylmuramoyl-pentapeptide- transferaseQuickGO ontologyBLASTP
8908268920761251UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetaseQuickGO ontologyBLASTP
892073892810738Muramidase invasin repeat familyQuickGO ontologyBLASTP
8928268939831158Cell Division Protein FtsWQuickGO ontologyBLASTP
8938928949501059N-acetylglucosaminyl transferaseQuickGO ontologyBLASTP