Pre_GI Gene

Some Help

Host: NC_009708 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009708:3035798 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
303579830374981701PTS system fructose-specific transporter subunit IIBCQuickGO ontologyBLASTP
303751330384519391-phosphofructokinaseQuickGO ontologyBLASTP
303844830395811134bifunctional PTS system fructose-specific transporter subunit IIAHPr proteinQuickGO ontologyBLASTP
30396033039734132hypothetical proteinBLASTP
30397313039844114hypothetical proteinBLASTP
30398433040298456hydrolase NUDIX family domain-containing proteinQuickGO ontologyBLASTP
30403913041389999ribose ABC transporter permeaseQuickGO ontologyBLASTP
304142530429991575ribose ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
304310830441961089ribose ABC transporter periplasmic proteinQuickGO ontologyBLASTP
30443123045022711ribose 5-phosphate isomerase AQuickGO ontologyBLASTP
304504230465951554carbohydrate kinaseQuickGO ontologyBLASTP
304659930480951497succinate-semialdehyde dehydrogenaseQuickGO ontologyBLASTP
304845930496011143hypothetical proteinBLASTP
30496133050563951D-isomer specific 2-hydroxyacid dehydrogenase family proteinQuickGO ontologyBLASTP
30505743051407834short chain dehydrogenasereductase family oxidoreductaseQuickGO ontologyBLASTP
30514763051730255hypothetical proteinBLASTP
305214230533861245tryptophan-specific transport proteinQuickGO ontologyBLASTP
30534903054062573elongation factor PQuickGO ontologyBLASTP
305420430553971194mannonate dehydrataseQuickGO ontologyBLASTP
30553493055507159hypothetical protein
30557033055822120hypothetical protein
305600130574731473mannitol dehydrogenase family proteinQuickGO ontologyBLASTP
30576323058375744uxu operon transcriptional regulatorQuickGO ontologyBLASTP