Pre_GI: BLASTP Hits

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Query: NC_010067:1116148:1127407 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 1127407, End: 1127847, Length: 441

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005139:518760:528045528045528485441Vibrio vulnificus YJ016 chromosome I, complete sequencephosphotransferase system, mannose/fructose-specific component IIA3e-39160
NC_012962:869295:884325884325884759435Photorhabdus asymbiotica, complete genomesimilar to putative pts system iia component yadi of escherichia coli4e-1890.1
NC_016818:3148000:314822731482273149189963Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completePTS system mannose/fructose/sorbose family transporter subunit IIB6e-1579.3
NC_017047:3212000:321229332122933213255963Rahnella aquatilis HX2 chromosome, complete genomePTS system mannose-specific transporter subunit IIAB2e-1478.2
NC_015061:3147691:314769131476913148653963Rahnella sp. Y9602 chromosome, complete genomePTS system, mannose/fructose/sorbose family, IIB subunit2e-1478.2
NC_014376:4369666:437413143741314374700570Clostridium saccharolyticum WM1 chromosome, complete genomePTS system fructose subfamily IIA component4e-1477
NC_015425:841754:863224863224863643420Clostridium botulinum BKT015925 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIA2e-1374.3
NC_016612:2902628:292817629281762928607432Klebsiella oxytoca KCTC 1686 chromosome, complete genomePTS system mannose-specific transporter subunit IIAB7e-1372.8
NC_008344:554229:554229554229554633405Nitrosomonas eutropha C91, complete genomePTS system fructose subfamily IIA component3e-1270.5
NC_009617:4436837:445280944528094453231423Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIA6e-1269.3
NC_014724:439594:4752374752374762471011Lactobacillus amylovorus GRL 1112 chromosome, complete genomePTS system, mannose-specific IIAB component9e-1268.9
NC_012880:2399205:240136324013632402304942Dickeya dadantii Ech703, complete genomePTS system, mannose/fructose/sorbose family, IIB subunit9e-1268.9
NC_010498:153755:154630154630155070441Escherichia coli SMS-3-5, complete genomePTS system IIA component domain-containing protein1e-1168.6
NC_015214:437733:4748524748524758621011Lactobacillus acidophilus 30SC chromosome, complete genomePTS system, mannose-specific IIAB component2e-1167.8
NC_009484:489398:496105496105496527423Acidiphilium cryptum JF-5 chromosome, complete genomePTS system fructose subfamily transporter subunit IIA4e-1167
NC_015186:597695:605052605052605474423Acidiphilium multivorum AIU301, complete genomephosphotransferase system enzyme IIA component4e-1167
NC_011740:165363:166238166238166678441Escherichia fergusonii ATCC 35469, complete genomeputative PTS Enzyme IIA7e-1166.2
NC_012947:3619384:363590136359013636341441Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completePTS system fructose subfamily IIA component6e-1166.2
NC_012967:145582:147380147380147820441Escherichia coli B str. REL606 chromosome, complete genomeputative PTS Enzyme IIA6e-1166.2
NC_012759:144576:144576144576145016441Escherichia coli BW2952 chromosome, complete genomeputative PTS Enzyme IIA2e-1064.7
NC_010468:3835259:385456638545663855006441Escherichia coli ATCC 8739, complete genomePTS system fructose subfamily IIA component2e-1064.7
AC_000091:144577:144577144577145017441Escherichia coli W3110 DNA, complete genomepredicted PTS Enzyme IIA2e-1064.7
NC_010473:118681:118681118681119121441Escherichia coli str. K-12 substr. DH10B, complete genomepredicted PTS Enzyme IIA2e-1064.7
NC_000913:144577:144577144577145017441Escherichia coli K12, complete genomepredicted PTS Enzyme IIA2e-1064.7
NC_014106:419511:4506944506944517011008Lactobacillus crispatus ST1, complete genomePTS system, mannose-specific IIAB component5e-1063.2
NC_009442:1158268:116773711677371168171435Streptococcus suis 05ZYH33 chromosome, complete genomephosphotransferase system, mannose/fructose-specific component IIA5e-1063.2
NC_013353:143358:145927145927146367441Escherichia coli O103:H2 str. 12009, complete genomePTS Enzyme IIA6e-1062.8
NC_009801:143426:145995145995146435441Escherichia coli E24377A, complete genomePTS system, IIA component6e-1062.8
NC_011748:143755:144630144630145070441Escherichia coli 55989, complete genomeputative PTS Enzyme IIA6e-1062.8
AP010958:143358:145927145927146367441Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted PTS Enzyme IIA6e-1062.8
CU928145:143755:144630144630145070441Escherichia coli 55989 chromosome, complete genomeputative PTS Enzyme IIA6e-1062.8
NC_008253:149693:149693149693150133441Escherichia coli 536, complete genomeputative PTS system IIA component Yadi9e-1062.4
NC_008563:149709:150584150584151024441Escherichia coli APEC O1, complete genomeputative PTS system IIA component YadI9e-1062.4
NC_007946:149733:150608150608151048441Escherichia coli UTI89, complete genomeputative PTS system IIA component YadI9e-1062.4
NC_011742:149732:150607150607151047441Escherichia coli S88 chromosome, complete genomePTS Enzyme IIA9e-1062.4
NC_011745:149594:150469150469150909441Escherichia coli ED1a chromosome, complete genomeputative PTS Enzyme IIA1e-0962
NC_015975:1936504:195217819521781953164987Lactobacillus ruminis ATCC 27782 chromosome, complete genomePTS system, mannose-specific IIAB component1e-0962
NC_015602:1339067:1346038134603813470451008Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeprotein-N(pi)-phosphohistidine--sugar phosphotransferase1e-0961.6
NC_018528:1681060:1689111168911116901211011Lactobacillus helveticus R0052 chromosome, complete genomePTS system mannost-specific transporter subunits IIAB1e-0961.6
CP002516:3949061:396557839655783966018441Escherichia coli KO11, complete genomePTS system fructose subfamily IIA component1e-0961.6
NC_013361:145461:147259147259147699441Escherichia coli O26:H11 str. 11368 chromosome, complete genomePTS Enzyme IIA1e-0961.6
NC_013364:143492:146061146061146501441Escherichia coli O111:H- str. 11128, complete genomeputative PTS Enzyme IIA1e-0961.6
NC_016902:3949061:396557839655783966018441Escherichia coli KO11FL chromosome, complete genomePTS system fructose subfamily transporter subunit IIA1e-0961.6
NC_004431:153907:154782154782155222441Escherichia coli CFT073, complete genomePutative PTS system IIA component yadI2e-0961.2
NC_010723:1379256:139787513978751398852978Clostridium botulinum E3 str. Alaska E43, complete genomePTS system, mannose/fructose/sorbose family, IIB component2e-0961.2
NC_011601:149428:150303150303150743441Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomePTS Enzyme IIA3e-0960.5
NC_008530:1775841:178186117818611782859999Lactobacillus gasseri ATCC 33323, complete genomePhosphotransferase system, mannose/fructose-specific component IIA3e-0960.5
NC_005362:1870620:187806118780611879056996Lactobacillus johnsonii NCC 533, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probable mannose specific4e-0960.1
NC_013504:1648551:165705116570511658046996Lactobacillus johnsonii FI9785 chromosome, complete genomephosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB, probably mannose specific5e-0960.1
NC_009089:581655:581655581655582062408Clostridium difficile 630, complete genomePTS system, IIa component8e-0959.3
NC_013199:392450:410950410950411366417Lactobacillus rhamnosus Lc 705, complete genomePTS system, sorbose IIA component8e-0959.3
NC_013192:2434664:245430424543042454747444Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIA subunit7e-0959.3
NC_008261:967973:969127969127970107981Clostridium perfringens ATCC 13124, complete genomePTS system, mannose/fructose/sorbose family, IIB component7e-0959.3
NC_016023:875416:885860885860886300441Bacillus coagulans 36D1 chromosome, complete genomePTS system fructose subfamily transporter subunit IIA9e-0958.9
NC_010814:2275199:231105023110502311442393Geobacter lovleyi SZ, complete genomePTS system fructose subfamily IIA component1e-0858.9
NC_013192:469771:485291485291486280990Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIA subunit3e-0857.4
NC_020409:560278:573195573195573635441Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completePTS system fructose subfamily IIA component4e-0857
NC_014100:172452:193231193231193665435Caulobacter segnis ATCC 21756 chromosome, complete genomePTS system fructose subfamily transporter subunit IIA6e-0856.2
NC_002937:1706000:171588917158891716326438Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completePTS system, IIA component1e-0755.5
NC_011660:2509362:251816925181692519134966Listeria monocytogenes HCC23 chromosome, complete genomePTS system mannose-specific eiiab component (eiiab-man)2e-0755.1
NC_014844:1634985:165915616591561659611456Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomePTS system fructose subfamily IIA component2e-0755.1
NC_015519:270637:289790289790290194405Tepidanaerobacter sp. Re1 chromosome, complete genomePTS system fructose subfamily transporter subunit IIA2e-0754.3
NC_015389:809474:819101819101819532432Coriobacterium glomerans PW2 chromosome, complete genomePTS system fructose subfamily IIA component3e-0753.9
NC_012559:2854640:285779828577982858199402Laribacter hongkongensis HLHK9, complete genomeProbable protein-N p-phosphohistidine-sugar phosphotransferase8e-0752.4
NC_014377:1897857:191152019115201911942423Thermosediminibacter oceani DSM 16646 chromosome, complete genomePTS system fructose subfamily IIA component1e-0652
NC_015975:1936504:195370019537001954119420Lactobacillus ruminis ATCC 27782 chromosome, complete genomePTS system mannose transporter subunit IIA2e-0650.8