Pre_GI Gene

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Host: NC_005362 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_005362:1870620 Lactobacillus johnsonii NCC 533, complete genome

Host Lineage: Lactobacillus johnsonii; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is a human isolate from the Nestle strain collection that has been studied for immunomodulation as well as pathogen inhibition. Probiotic microorganism. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus johnsonii is found in the human gut. It is a member of the acidophilus group of intestinal lactobacilli that has been extensively studied for their "probiotic" activities.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
187062018720201401hypothetical proteinBLASTP
18720381872763726hypothetical proteinBLASTP
187292618743081383hypothetical proteinBLASTP
187429818756921395hypothetical proteinBLASTP
18758501876212363hypothetical proteinBLASTP
18762771877206930phosphoenolpyruvate-dependent sugar phosphotransferase system EIID probable mannose specificQuickGO ontologyBLASTP
18772361878039804phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC probable mannose specificQuickGO ontologyBLASTP
18780611879056996phosphoenolpyruvate-dependent sugar phosphotransferase system EIIAB probable mannose specificQuickGO ontologyBLASTP
1879252187932473tRNA-AsnQuickGO ontology
187933718794531175S ribosomal RNAQuickGO ontologyBLASTP
18794401882488304923S ribosomal RNAQuickGO ontologyBLASTP
1882545188261773tRNA-AlaQuickGO ontologyBLASTP
1882653188272674tRNA-IleQuickGO ontology
18828211884471165116S ribosomal RNAQuickGO ontologyBLASTP
1884764188483976tRNA-AsnQuickGO ontology
188485218849681175S ribosomal RNAQuickGO ontologyBLASTP
18849551888003304923S ribosomal RNAQuickGO ontologyBLASTP
1888060188813273tRNA-AlaQuickGO ontologyBLASTP
1888168188824174tRNA-IleQuickGO ontology
18883361889986165116S ribosomal RNAQuickGO ontologyBLASTP
189038518917821398amino acid transporterQuickGO ontologyBLASTP
189190918940232115ATP-dependent clp protease ATP-binding subunit clpEQuickGO ontologyBLASTP