Pre_GI: BLASTP Hits

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Query: NC_009787:17344:4718 Escherichia coli E24377A plasmid pETEC_35, complete sequence

Start: 4718, End: 6949, Length: 2232

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: ETEC is the leading cause of traveler's diarrhea, characterized by a large volume of watery diarrhea. ETEC primarily colonizes the small intestine by way of the pili. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016846:24500:5201252012542912280Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,conjugal transfer protein TraD0679
NC_007385:157516:1664251664251686262202Shigella sonnei Ss046 plasmid pSS_046, complete sequenceTraD protein0639
NC_010660:175200:1802001802001822452046Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence8e-178624
NC_007607:87000:9356593565950791515Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequencehypothetical protein1e-161570
NC_009998:62000:7347873478756042127Shewanella baltica OS195 plasmid pS19501, complete sequencetype IV conjugative transfer system coupling protein TraD2e-117423
NC_004460:708416:7124647124647145572094Vibrio vulnificus CMCP6 chromosome II, complete sequenceType IV secretory pathway, VirD4 component6e-105382
NC_008322:1186000:1186944118694411889171974Shewanella sp. MR-7, complete genomehypothetical protein2e-68261
NC_009007:57804:7373273732760142283Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceTraG8e-61235
NC_010606:25090:2655826558287172160Acinetobacter baumannii ACICU plasmid pACICU2, complete sequenceType IV secretory pathway, VirD4 component2e-59231
NC_010793:1811401:1863476186347618652301755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD1e-59231
NC_009488:89844:1125211125211142781758Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-58228
NC_010793:1468849:1468849146884914703841536Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD2e-58227
NC_017044:702483:7220847220847237781695Rickettsia parkeri str. Portsmouth chromosome, complete genomeconjugative transfer protein TraD3e-57223
NC_010793:416849:4208424208424225961755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD4e-57223
NC_010793:1158279:1169124116912411708781755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD4e-57223
NC_010793:1508974:1513498151349815152521755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD4e-57223
NC_007722:851129:8667998667998691382340Erythrobacter litoralis HTCC2594, complete genomeTraD7e-57222
NC_007722:168937:1869601869601892992340Erythrobacter litoralis HTCC2594, complete genomeTraD4e-56219
NC_007722:2954876:2956825295682529590802256Erythrobacter litoralis HTCC2594, complete genomeTraD8e-50199
NC_010793:1628500:1641810164181016428201011Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD4e-46187
NC_009488:854500:857766857766858722957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein7e-46186
NC_009488:803873:809270809270810226957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein5e-45183
NC_009488:1249492:125489812548981255854957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein5e-45183
NC_009488:1465781:1479205147920514803501146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-44181
NC_014819:25765:4626046260488752616Asticcacaulis excentricus CB 48 plasmid pASTEX02, completehypothetical protein3e-44180
NC_009488:1673756:1685432168543216865771146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-43178
NC_009488:1391975:1405801140580114069461146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-43178
NC_009484:2660048:2677156267715626790061851Acidiphilium cryptum JF-5 chromosome, complete genomeType IV secretory pathway VirD4 components-like protein5e-42173
NC_012483:3672768:3674604367460436766042001Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein5e-42173
NC_011916:467106:4915124915124933291818Caulobacter crescentus NA1000 chromosome, complete genomeconjugation protein, ATP binding domain trwB6e-42173
NC_012483:3731542:3752837375283737548311995Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein6e-40166
NC_011891:1225000:1245654124565412471831530Anaeromyxobacter dehalogenans 2CP-1, complete genometype IV secretion system protein VirD44e-39163
NC_016631:3917253:3934403393440339363731971Granulicella mallensis MP5ACTX8 chromosome, complete genomeType IV secretion system, TraD, DNA-binding domain protein5e-38159
NC_017028:1030000:104422810442281045058831Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeputative conjugative transfer protein TraD3e-37157
NC_010170:3908500:3929234392923439308801647Bordetella petrii, complete genometype IV secretion system protein VirD46e-35149
NC_015458:327009:3591473591473608261680Pusillimonas sp. T7-7 chromosome, complete genomeTrwB2e-32141
NC_011296:281930:2970702970702987821713Thermodesulfovibrio yellowstonii DSM 11347, complete genomeputative conjugative transfer protein TraD2e-31138
NC_016626:1751159:1754229175422917558721644Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative TraB protein, type IV secretion system3e-29130
NC_009488:1430693:143360714336071434488882Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein5e-29130
NC_017044:702483:719163719163719666504Rickettsia parkeri str. Portsmouth chromosome, complete genomeputative conjugative transfer protein TraD6e-27123
NC_020453:3950838:3988683398868339904941812Agromonas oligotrophica S58 DNA, complete genomeputative type IV secretory pathway VirD4 components1e-20102
NC_007404:1776147:1776147177614717785012355Thiobacillus denitrificans ATCC 25259, complete genomeputative type IV secretory pathway VirD4 components8e-1892.8
NC_010943:3069082:3098061309806130999351875Stenotrophomonas maltophilia K279a, complete genomeputative type IV secretory protein conjugation protein TraD8e-1583.2
NC_017371:1030148:1043680104368010454281749Helicobacter pylori Gambia94/24 chromosome, complete genomeVirD4 coupling protein1e-0965.5
NC_017361:930280:9572629572629590071746Helicobacter pylori SouthAfrica7 chromosome, complete genomeVirD4 coupling protein2e-0965.5
NC_011333:1040192:1060476106047610622031728Helicobacter pylori G27 chromosome, complete genomecag island DNA transfer protein2e-0965.1
NC_010698:870312:8973628973628990891728Helicobacter pylori Shi470, complete genomeconjugal transfer protein (traG)3e-0964.7
NC_017379:1035464:1043473104347310452001728Helicobacter pylori Puno135 chromosome, complete genomeconjugal transfer protein (traG)3e-0964.7
NC_015850:1006980:1013904101390410157931890Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein2e-0964.7
NC_017376:57500:8413784137858641728Helicobacter pylori SNT49 chromosome, complete genomeconjugal transfer protein (traG)2e-0964.7
NC_014555:1526775:1552006155200615537541749Helicobacter pylori PeCan4 chromosome, complete genomeconjugal transfer protein (traG)3e-0964.3
NC_017358:220900:2426052426052443321728Helicobacter pylori Cuz20 chromosome, complete genomeconjugal transfer protein (traG)4e-0963.9
NC_011498:448000:4761054761054778321728Helicobacter pylori P12, complete genomeVirD4 coupling protein5e-0963.5
NC_017357:973392:9884039884039901451743Helicobacter pylori 908 chromosome, complete genomehypothetical protein7e-0963.2
NC_017374:974279:9892909892909910321743Helicobacter pylori 2017 chromosome, complete genomeputative conjugal transfer protein7e-0963.2
NC_017381:982216:9972459972459989871743Helicobacter pylori 2018 chromosome, complete genomeconjugal transfer protein7e-0963.2
NC_017367:278916:2990802990803008371758Helicobacter pylori F57, complete genomeconjugal transfer protein6e-0963.2
NC_011987:53760:5376053760561232364Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequenceTRAG protein1e-0862.4
NC_012969:2136243:2172129217212921743752247Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeType IV secretory pathway VirD4 protein-like protein7e-0860.1
NC_014502:113839:1141601141601160821923Cyanothece sp. PCC 7822 plasmid Cy782203, complete sequenceTRAG family protein8e-0859.7
NC_017361:1528239:1543901154390115460332133Helicobacter pylori SouthAfrica7 chromosome, complete genomeconjugal transfer protein (traG)2e-0758.2
NC_011737:102615:1062651062651081811917Cyanothece sp. PCC 7424 plasmid pP742402, complete sequencetransfer complex protein TrsK-like protein2e-0758.2
NC_011729:2732163:2747512274751227492211710Cyanothece sp. PCC 7424 chromosome, complete genometransfer complex protein TrsK-like protein4e-0757.4
NC_002939:47406:789407894079272333Geobacter sulfurreducens PCA, complete genomeTraD protein, putative3e-0654.7