Pre_GI Gene

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Host: NC_010793 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010793:1811401 Orientia tsutsugamushi str. Ikeda, complete genome

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1811401181162522550S ribosomal protein L31QuickGO ontologyBLASTP
1811635181192228850S ribosomal protein L28QuickGO ontologyBLASTP
18121671813039873hypothetical proteinBLASTP
181305718143131257prolinebetaine transporterQuickGO ontologyBLASTP
18150421815794753hypothetical protein
181617318173841212penicillin-binding protein 4QuickGO ontologyBLASTP
181741018192031794asparaginyl-tRNA synthetaseQuickGO ontologyBLASTP
181946718236574191DNA-directed RNA polymerase beta prime chainQuickGO ontologyBLASTP
182377418278984125DNA-directed RNA polymerase beta chainQuickGO ontologyBLASTP
1828214182860339050S ribosomal protein L7L12QuickGO ontologyBLASTP
1828625182913451050S ribosomal protein L10QuickGO ontologyBLASTP
1829138182988775050S ribosomal protein L1QuickGO ontologyBLASTP
1829891183033744750S ribosomal protein L11QuickGO ontologyBLASTP
18303771830913537transcription antitermination protein NusGQuickGO ontologyBLASTP
18309561831156201preprotein translocase SecE subunitQuickGO ontologyBLASTP
1831228183130275tRNA-TrpQuickGO ontology
183142018326041185elongation factor EF-TuQuickGO ontologyBLASTP
183277718335417651-acyl-sn-glycerol-3-phosphate acyltransferaseQuickGO ontologyBLASTP
18336581834269612recombination protein RecRQuickGO ontologyBLASTP
18343571834893537putative intracellular septation proteinQuickGO ontologyBLASTP
18348971835736840high-affinity Fe2Pb2 permeaseQuickGO ontologyBLASTP
18357651836130366hypothetical proteinBLASTP
1836497183657276tRNA-LysQuickGO ontologyBLASTP
183659618378281233hypothetical proteinBLASTP
18380141838745732glutamine ABC transporter ATP-binding protein GlnQQuickGO ontologyBLASTP
18387381839355618probable glutamine transport system permease protein GlnPQuickGO ontologyBLASTP
18404181840651234transposaseQuickGO ontologyBLASTP
18407801841172393transposaseQuickGO ontologyBLASTP
1842280184235677tRNA-IleQuickGO ontology
18438891844155267putative integraseQuickGO ontologyBLASTP
18453971845678282transposaseQuickGO ontologyBLASTP
184622018473381119putative integraseQuickGO ontologyBLASTP
18474641847799336hypothetical proteinBLASTP
18477991848350552putative conjugative transfer protein TraEQuickGO ontologyBLASTP
18483471848823477hypothetical proteinBLASTP
18491881849523336hypothetical proteinBLASTP
184957718509111335putative conjugative transfer protein TraBQuickGO ontologyBLASTP
18509111851204294hypothetical proteinBLASTP
185118518536742490putative conjugative transfer protein TraCQuickGO ontologyBLASTP
18536711854330660putative conjugative transfer protein TraWQuickGO ontologyBLASTP
18544161854619204hypothetical proteinBLASTP
18546231855600978putative conjugative transfer protein TraUQuickGO ontologyBLASTP
18556231856006384putative conjugative transfer protein TrbCQuickGO ontologyBLASTP
185600318576971695putative conjugative transfer protein TraNQuickGO ontologyBLASTP
18576941858398705putative conjugative transfer protein TraFQuickGO ontologyBLASTP
18583951859288894putative conjugative transfer protein TraHQuickGO ontologyBLASTP
18592181859697480putative conjugative transfer protein TraHQuickGO ontologyBLASTP
185969718623242628putative conjugative transfer protein TraGQuickGO ontologyBLASTP
186233718634761140TPR repeat-containing protein 01_10QuickGO ontologyBLASTP
186347618652301755putative conjugative transfer protein TraDQuickGO ontologyBLASTP
186523218662511020putative transposaseQuickGO ontologyBLASTP
186623618689082673putative conjugative transfer protein TraIQuickGO ontologyBLASTP
186917718715432367putative conjugative transfer protein TraAQuickGO ontologyBLASTP