Pre_GI Gene

Some Help

Host: NC_017044 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017044:702483 Rickettsia parkeri str. Portsmouth chromosome, complete genome

Host Lineage: Rickettsia parkeri; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: Animal pathogen in Mammalia (intracellular obligate). Rickettsiae are obligate intracellular Gram-negative bacteria mostly found in arthropods, some of which cause mild to severe diseases in humans. Rickettsia parkeri, a member of the spotted fever group Rickettsia (SFGR), was first isolated from the Gulf Coast tick, Amblyomma maculatum, in 1937. In 2004, the first confirmed human infection with R. parkeri was reported in a 40-year-old man from the Tidewater area of coastal Virginia. The agent was isolated in cell culture from an eschar biopsy specimen and designated the Portsmouth strain; recently, the first recognized case of tick bite-associated human infection was described.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7024837091546672preprotein translocase SecA subunit-like proteinQuickGO ontologyBLASTP
709338709646309conjugal transfer protein TraDQuickGO ontologyBLASTP
7100657111951131transposaseQuickGO ontologyBLASTP
711603711968366reverse transcriptaseQuickGO ontologyBLASTP
712276712383108RNA-directed DNA polymeraseQuickGO ontology
712487713059573reverse transcriptaseQuickGO ontologyBLASTP
7137857179214137conjugal transfer protein TraAQuickGO ontologyBLASTP
717933718925993transposaseQuickGO ontologyBLASTP
719163719666504putative conjugative transfer protein TraDQuickGO ontologyBLASTP
720422720820399conjugal transfer protein TraAQuickGO ontologyBLASTP
7208587219011044transposaseQuickGO ontologyBLASTP
7220847237781695conjugative transfer protein TraDQuickGO ontologyBLASTP
724964725371408conjugative transfer protein TraGQuickGO ontologyBLASTP
725338726231894F pilus assembly protein TraHQuickGO ontologyBLASTP
726221726646426F pilus assembly protein TraFQuickGO ontologyBLASTP
727400727567168hypothetical proteinBLASTP
7277517287791029isopentenyl pyrophosphate isomeraseQuickGO ontologyBLASTP
728868729089222Putative acetyltransferaseQuickGO ontologyBLASTP
729123729338216hypothetical protein
729980730276297hypothetical proteinBLASTP