Pre_GI Gene

Some Help

Host: NC_011987 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011987:53760 Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
52651537631113type IV secretion proteinQuickGO ontologyBLASTP
53760561232364TRAG proteinQuickGO ontologyBLASTP
5625156943693hypothetical protein
57333586281296replication protein CQuickGO ontologyBLASTP
5862858804177hypothetical protein
59167607621596hypothetical protein
6077261767996hypothetical proteinBLASTP
6248862748261SyrB2 transcriptional regulatorQuickGO ontologyBLASTP
6299063604615hypothetical protein
6364763790144hypothetical protein
6392164163243BLASTP
6435865350993hypothetical protein
65985673251341Na-driven multidrug efflux pumpQuickGO ontologyBLASTP
67363687211359NikO proteinQuickGO ontologyBLASTP
68718699171200hypothetical protein
69905716831779asparagine synthase glutamine-hydrolyzingQuickGO ontologyBLASTP
7167672485810hydrolase CofQuickGO ontologyBLASTP
72533741461614ATP-binding proteinQuickGO ontologyBLASTP
7420374550348hypothetical proteinBLASTP
74553760851533transposase number 3 for insertion sequenceQuickGO ontologyBLASTP
7679477273480hypothetical proteinBLASTP
77566796832118transposaseQuickGO ontologyBLASTP
7965479899246transposase number 2 for insertion sequenceQuickGO ontologyBLASTP
7989680339444transposase number 1 for insertion sequenceQuickGO ontologyBLASTP
80450820781629hypothetical proteinBLASTP
8237383014642BLASTP