Query: NC_011987:53760 Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence
Start: 53760, End: 83099, Length: 29340
Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_011987:362997 | 362997 | 390499 | 27503 | Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence | 0 | 4044 | BLASTN svg | BLASTP svg |
| NC_013194:69634 | 69634 | 99037 | 29404 | Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_012587:2326000* | 2326000 | 2347642 | 21643 | Rhizobium sp. NGR234, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_012586:897148 | 897148 | 921106 | 23959 | Rhizobium sp. NGR234 plasmid pNGR234b, complete sequence | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_011991:65368 | 65368 | 91971 | 26604 | Agrobacterium vitis S4 plasmid pAtS4b, complete sequence | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
| NC_014923:5940500 | 5940500 | 5966426 | 25927 | Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_015675:6493444 | 6493444 | 6538296 | 44853 | Mesorhizobium opportunistum WSM2075 chromosome, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_019973:5869500 | 5869500 | 5895386 | 25887 | Mesorhizobium australicum WSM2073, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_011004:1174813 | 1174813 | 1198110 | 23298 | Rhodopseudomonas palustris TIE-1, complete genome | 9e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_007762:88979 | 88979 | 114840 | 25862 | Rhizobium etli CFN 42 plasmid p42a, complete sequence | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_002678:4885790 | 4885790 | 4933870 | 48081 | Mesorhizobium loti MAFF303099, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_009720:5079048 | 5079048 | 5102099 | 23052 | Xanthobacter autotrophicus Py2, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_004463:1717890 | 1717890 | 1748152 | 30263 | Bradyrhizobium japonicum USDA 110, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014664:1560926 | 1560926 | 1581642 | 20717 | Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_010505:1264758 | 1264758 | 1296728 | 31971 | Methylobacterium radiotolerans JCM 2831, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |