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Query: NC_011987:53760 Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence

Start: 53760, End: 83099, Length: 29340

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011987:36299736299739049927503Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence04044BLASTN svgBLASTP svg
NC_013194:69634696349903729404Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete2e-1799.6BLASTN svgBLASTP svg
NC_012587:2326000*2326000234764221643Rhizobium sp. NGR234, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_012586:89714889714892110623959Rhizobium sp. NGR234 plasmid pNGR234b, complete sequence2e-1799.6BLASTN svgBLASTP svg
NC_011991:65368653689197126604Agrobacterium vitis S4 plasmid pAtS4b, complete sequence1e-1593.7BLASTN svgBLASTP svg
NC_014923:59405005940500596642625927Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete6e-1487.7BLASTN svgBLASTP svg
NC_015675:64934446493444653829644853Mesorhizobium opportunistum WSM2075 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_019973:58695005869500589538625887Mesorhizobium australicum WSM2073, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_011004:11748131174813119811023298Rhodopseudomonas palustris TIE-1, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_007762:889798897911484025862Rhizobium etli CFN 42 plasmid p42a, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_002678:48857904885790493387048081Mesorhizobium loti MAFF303099, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009720:50790485079048510209923052Xanthobacter autotrophicus Py2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004463:17178901717890174815230263Bradyrhizobium japonicum USDA 110, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014664:15609261560926158164220717Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010505:12647581264758129672831971Methylobacterium radiotolerans JCM 2831, complete genome3e-0661.9BLASTN svgBLASTP svg