Pre_GI: BLASTP Hits

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Query: NC_009698:3185359:3190124 Clostridium botulinum A str. Hall chromosome, complete genome

Start: 3190124, End: 3191137, Length: 1014

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum A strain Hall was received at Fort Detrick from Harvard University in 1947. The strain is presumably one from Dr. Ivan Hall's collection, but the exact strain number has been lost. This strain produces high amounts of type A toxin. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009697:3291500:3293017329301732940301014Clostridium botulinum A str. ATCC 19397 chromosome, completedehydrogenase, FMN-dependent0672
NC_009495:3309550:3317028331702833180411014Clostridium botulinum A str. ATCC 3502 chromosome, complete genomedehydrogenase, FMN-dependent0672
NC_012658:3387774:3395422339542233964351014Clostridium botulinum Ba4 str. 657 chromosome, complete genomedehydrogenase0666
NC_012563:3556763:3559159355915935601721014Clostridium botulinum A2 str. Kyoto, complete genomedehydrogenase, FMN-dependent0662
NC_010516:3368951:3377658337765833786711014Clostridium botulinum B1 str. Okra, complete genomedehydrogenase, FMN-dependent0662
NC_014328:3747973:3754411375441137554271017Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative FMN-dependent alpha-hydroxy acid dehydrogenase1e-166585
NC_003366:2143173:2153614215361421546361023Clostridium perfringens str. 13, complete genomeprobable glycolate oxidase3e-135481
NC_008262:2025699:2037558203755820385801023Clostridium perfringens SM101, complete genomehydroxyacid oxidase 22e-134479
NC_015565:2027279:2078924207892420799431020Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete(S)-2-hydroxy-acid oxidase9e-115413
NC_013385:1064188:1086930108693010879491020Ammonifex degensii KC4, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase3e-110398
NC_013173:2261396:2269518226951822705341017Desulfomicrobium baculatum DSM 4028, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase3e-100365
NC_015589:2878000:2894051289405128950731023Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase2e-96352
NC_014150:2617072:2623245262324526242581014Brachyspira murdochii DSM 12563 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase2e-85316
NC_012225:2834642:2840533284053328415461014Brachyspira hyodysenteriae WA1, complete genomeFMN-dependent alpha-hydroxyacid oxidizing enzyme6e-85314
NC_019908:1467000:1487172148717214881851014Brachyspira pilosicoli P43/6/78 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase2e-82305
NC_018607:2375344:2394891239489123959041014Brachyspira pilosicoli B2904 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase3e-82305
NC_015873:380485:4018204018204028541035Megasphaera elsdenii DSM 20460, complete genomedehydrogenase2e-67256
NC_013730:2187898:2194127219412721951761050Spirosoma linguale DSM 74, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase1e-36153
NC_017187:691769:7003927003927014681077Arcobacter butzleri ED-1, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase4e-34145
NC_018866:1279000:127900012790001279929930Dehalobacter sp. DCA chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase4e-33142
NC_018867:1357540:135754013575401358469930Dehalobacter sp. CF chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase4e-33142
NC_012721:182965:2045582045582056761119Burkholderia glumae BGR1 chromosome 2, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase3e-31136
NC_015385:351393:368592368592369443852Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein6e-30131
NC_003047:2477810:2483254248325424843481095Sinorhizobium meliloti 1021, complete genomePUTATIVE L-LACTATE DEHYDROGENASE (CYTOCHROME) PROTEIN2e-29130
NC_012917:4646491:4660211466021146613711161Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase2e-29129
NC_015590:2290359:2295803229580322968971095Sinorhizobium meliloti AK83 chromosome 1, complete sequence(S)-2-hydroxy-acid oxidase2e-29129
NC_017322:2191391:2196835219683521979291095Sinorhizobium meliloti BL225C chromosome, complete genome(S)-2-hydroxy-acid oxidase2e-29129
NC_017325:967598:9849539849539860471095Sinorhizobium meliloti SM11 chromosome, complete genome(S)-2-hydroxy-acid oxidase2e-29129
NC_004547:138500:1402681402681414281161Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeL-lactate dehydrogenase7e-29128
NC_010322:5293652:5293652529365252947971146Pseudomonas putida GB-1 chromosome, complete genomeL-lactate dehydrogenase2e-28126
NC_010501:734363:7661877661877673321146Pseudomonas putida W619, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase3e-28125
NC_008027:775896:7964437964437975881146Pseudomonas entomophila L48, complete genomeL-lactate dehydrogenase, FMN linked5e-28125
NC_013501:1691532:1709845170984517110351191Rhodothermus marinus DSM 4252, complete genomeLactate 2-monooxygenase1e-27123
NC_007606:3755155:3775620377562037768101191Shigella dysenteriae Sd197, complete genomeL-lactate dehydrogenase5e-27122
NC_004337:3590323:3752425375242537536151191Shigella flexneri 2a str. 301, complete genomeL-lactate dehydrogenase5e-27122
NC_012759:3648500:3666176366617636673661191Escherichia coli BW2952 chromosome, complete genomeL-lactate dehydrogenase5e-27122
NC_012721:137046:1455441455441467071164Burkholderia glumae BGR1 chromosome 2, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase7e-27121
NC_012984:3077004:3096118309611830972181101Lactobacillus plantarum JDM1, complete genomelactate oxidase1e-26120
NC_014311:1309562:1327676132767613288271152Ralstonia solanacearum PSI07 chromosome, complete genomeL-lactate dehydrogenase, FMN-linked3e-26119
NC_007946:4779745:4807909480790948091261218Escherichia coli UTI89, complete genomeputative FMN-dependent dehydrogenase5e-25115
NC_008253:3941938:3966658396665839678871230Escherichia coli 536, complete genomeputative FMN-dependent dehydrogenase4e-25115
NC_012660:4734363:4747036474703647481931158Pseudomonas fluorescens SBW25 chromosome, complete genomeL-lactate dehydrogenase9e-25114
NC_007963:1190847:1214439121443912156381200Chromohalobacter salexigens DSM 3043, complete genome(S)-2-hydroxy-acid oxidase1e-24114
NC_020126:3383902:3387540338754033887631224Myxococcus stipitatus DSM 14675, complete genome(S)-2-hydroxy-acid oxidase2e-24113
NC_018643:1309804:1315929131592913170801152Alpha proteobacterium HIMB5 chromosome, complete genomedehydrogenase, FMN-dependent5e-24112
NC_014323:245979:2489332489332501741242Herbaspirillum seropedicae SmR1 chromosome, complete genomeFMN-dependent L-lactate dehydrogenase5e-24112
NC_013199:2386924:2393109239310923942241116Lactobacillus rhamnosus Lc 705, complete genomeL-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase4e-24112
NC_015514:3307199:3340787334078733419981212Cellulomonas fimi ATCC 484 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase3e-24112
NC_020995:2636519:2640621264062126417241104Enterococcus casseliflavus EC20, complete genomeL-lactate oxidase3e-24112
NC_010999:2483000:2485994248599424871091116Lactobacillus casei, complete genomeNAD-independent L-lactate dehydrogenase4e-23108
NC_003198:1378457:1396641139664113978431203Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative glycolate oxidase1e-22107
NC_010102:1388344:1414521141452114157231203Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-22107
NC_018644:516157:5186995186995198561158Alpha proteobacterium HIMB59 chromosome, complete genomedehydrogenase, FMN-dependent3e-22106
NC_012125:2143246:2169433216943321706381206Salmonella enterica subsp. enterica serovar Paratyphi C strainglycolate oxidase2e-22106
NC_013850:2182337:2182337218233721835211185Klebsiella variicola At-22 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase1e-21103
NC_003116:1488576:1499437149943715006091173Neisseria meningitidis Z2491, complete genomeL-lactate dehydrogenase5e-21102
NC_017505:1338661:1351557135155713527291173Neisseria meningitidis alpha710 chromosome, complete genomeL-lactate dehydrogenase5e-21102
NC_017512:1264542:1275403127540312765751173Neisseria meningitidis WUE 2594, complete genomeL-lactate dehydrogenase (cytochrome)5e-21102
NC_011035:1033942:1045422104542210465941173Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative L-lactate dehydrogenase4e-21102
NC_017511:950411:9612479612479624191173Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative L-lactate dehydrogenase4e-21102
NC_010677:1621500:1657548165754816587051158Francisella tularensis subsp. mediasiatica FSC147, complete genomeL-lactate dehydrogenase4e-21102
NC_002946:618439:6259916259916271631173Neisseria gonorrhoeae FA 1090, complete genomeputative L-lactate dehydrogenase4e-21102
NC_013016:1257942:1271346127134612725871242Neisseria meningitidis alpha14 chromosome, complete genomeL-lactate dehydrogenase6e-21101
NC_017517:1377617:1389198138919813903581161Neisseria meningitidis M01-240355 chromosome, complete genomeL-lactate dehydrogenase7e-21101
NC_017516:917817:9255519255519267111161Neisseria meningitidis H44/76 chromosome, complete genomeL-lactate dehydrogenase7e-21101
NC_010505:2690939:2704608270460827057531146Methylobacterium radiotolerans JCM 2831, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase2e-20100
NC_009257:963536:9773809773809785221143Francisella tularensis subsp. tularensis WY96-3418 chromosome,L-lactate dehydrogenase2e-20100
NC_008369:939356:942179942179943066888Francisella tularensis subsp. holarctica OSU18, complete genomeL-lactate dehydrogenase (cytochrome)4e-2099
NC_009749:937412:9399549399549411231170Francisella tularensis subsp. holarctica FTA, complete genomeL-lactate dehydrogenase5e-2099
NC_007880:935670:9382129382129393811170Francisella tularensis subsp. holarctica, complete genomeL-lactate dehydrogenase5e-2099
NC_008314:477722:5187525187525198971146Ralstonia eutropha H16 chromosome 2, complete sequenceL-Lactate cytochrome reductase6e-2098.6
NC_011205:1633353:1659562165956216606981137Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853L-lactate oxidase1e-1997.4
NC_008025:669281:6713996713996726701272Deinococcus geothermalis DSM 11300, complete genomeLactate 2-monooxygenase6e-1995.1
NC_008312:3793760:3834377383437738355341158Trichodesmium erythraeum IMS101, complete genomeL-lactate dehydrogenase (cytochrome)2e-1893.6
NC_017186:2252438:2255591225559122568021212Amycolatopsis mediterranei S699 chromosome, complete genomeL-lactate dehydrogenase2e-1893.2
NC_014318:2252417:2255570225557022567811212Amycolatopsis mediterranei U32 chromosome, complete genomeL-lactate dehydrogenase2e-1893.2
NC_006677:1255079:1276029127602912771741146Gluconobacter oxydans 621H, complete genomePutative oxidoreductase3e-1892.8
NC_015703:3842144:3868489386848938696341146Runella slithyformis DSM 19594 chromosome, complete genomeL-lactate dehydrogenase (cytochrome)1e-1790.9
NC_014306:2518996:2535516253551625367571242Erwinia billingiae Eb661, complete genomeL-lactate dehydrogenase (Cytochrome)1e-1790.9
NC_012590:850130:8725578725578738251269Corynebacterium aurimucosum ATCC 700975, complete genomeL-lactate dehydrogenase3e-1789.7
NC_020911:3046916:3063151306315130642961146Octadecabacter antarcticus 307, complete genomecytochrome containing L-lactate dehydrogenase LldD9e-1684.7
NC_014041:3197192:3206232320623232073831152Zunongwangia profunda SM-A87 chromosome, complete genomeL-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase2e-1584
NC_010676:2658495:2664906266490626661141209Burkholderia phytofirmans PsJN chromosome 2, complete sequenceL-lactate dehydrogenase (cytochrome)2e-1583.6
NC_015574:1541613:1553725155372515547801056Methanobacterium sp. SWAN-1 chromosome, complete genomeIsopentenyl-diphosphate delta-isomerase8e-1581.6
NC_020911:3410857:3428035342803534292191185Octadecabacter antarcticus 307, complete genomeL-lactate dehydrogenase LldD9e-1581.3
NC_007951:2233676:2234389223438922355791191Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative L-lactate dehydrogenase3e-1479.7
NC_010623:72500:8190181901831001200Burkholderia phymatum STM815 chromosome 2, complete sequenceL-lactate dehydrogenase (cytochrome)3e-1376.3
NC_005126:1265071:1271090127109012722381149Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-1375.9
NC_019977:1621939:1627137162713716282671131Methanomethylovorans hollandica DSM 15978, complete genomeisopentenyl-diphosphate delta-isomerase, type 23e-1273.2
NC_013947:1570000:1585569158556915865971029Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeFMN-dependent alpha-hydroxy acid dehydrogenase3e-1273.2
NC_017243:1558000:1577367157736715795142148Brachyspira intermedia PWS/A chromosome, complete genomeL-lactate dehydrogenase7e-1271.6
NC_018876:863314:8748438748438759461104Methanolobus psychrophilus R15 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase1e-1171.2
NC_007952:3196085:3228502322850232296861185Burkholderia xenovorans LB400 chromosome 2, complete sequenceS-mandelate dehydrogenase (MdlB)5e-1168.9
NC_007681:979815:9918489918489928971050Methanosphaera stadtmanae DSM 3091, complete genomeisopentenyl-diphosphate delta-isomerase6e-1168.6
NC_003551:723901:7378727378727389961125Methanopyrus kandleri AV19, complete genomeisopentenyl pyrophosphate isomerase7e-1065.1
NC_009515:1409912:1463857146385714649031047Methanobrevibacter smithii ATCC 35061, complete genomeisopentenyl pyrophosphate isomerase8e-1065.1
NC_000909:762859:7853037853037863821080Methanocaldococcus jannaschii DSM 2661, complete genomeisopentenyl pyrophosphate isomerase5e-0962
NC_014471:163404:1668421668421679841143Ignisphaera aggregans DSM 17230 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase, type 22e-0860.1
NC_014150:3085013:3107308310730831094792172Brachyspira murdochii DSM 12563 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain protein ATP-grasp5e-0858.9
NC_008148:2498000:2515739251573925171211383Rubrobacter xylanophilus DSM 9941, complete genomeferredoxin-dependent glutamate synthase3e-0756.2
NC_015931:857327:8670268670268681501125Pyrolobus fumarii 1A, complete genomeisopentenyl-diphosphate delta-isomerase, type 22e-0653.5
NC_014374:318528:3270113270113281441134Acidilobus saccharovorans 345-15 chromosome, complete genomeisopentenyl pyrophosphate isomerase2e-0653.5
NC_015435:120334:1311751311751322751101Metallosphaera cuprina Ar-4 chromosome, complete genomeisopentenyl pyrophosphate isomerase4e-0652.4
NC_008698:235688:2398392398392409241086Thermofilum pendens Hrk 5, complete genomeisopentenyl-diphosphate delta-isomerase, type 25e-0652.4
NC_013790:2690740:2699212269921227006991488Methanobrevibacter ruminantium M1 chromosome, complete genomeglutamate synthase alpha subunit GltA9e-0651.6